RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	PRDM14	Q9GZV8	571 aa		7.01	□□□□□ -1.29
SFPQ-208	ENST00000485365	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.01	□□□□□ -1.29
SFPQ-208	ENST00000485365	UHRF1BP1	Q6BDS2	1440 aa		7.01	□□□□□ -1.29
SFPQ-208	ENST00000485365	CNTLN	Q9NXG0	1405 aa		7.01	□□□□□ -1.29
SFPQ-208	ENST00000485365	KANK1	Q14678	1352 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365		A0A1W2PQ45	241 aa	Predicted RBP	7	□□□□□ -1.29
SFPQ-208	ENST00000485365		A0A1W2PQY0	241 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365	CTSH	P09668	335 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365	ZNF200	P98182	395 aa	Predicted RBP	7	□□□□□ -1.29
SFPQ-208	ENST00000485365	VWA3B	Q502W6	1294 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365	REC114	Q7Z4M0	266 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365	FBXO27	Q8NI29	283 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365	AGL	P35573	1532 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365	FER1L4	A9Z1Z3	1794 aa		7	□□□□□ -1.29
SFPQ-208	ENST00000485365	RAG1	P15918	1043 aa		6.99	□□□□□ -1.29
SFPQ-208	ENST00000485365	MPP2	Q14168	576 aa		6.99	□□□□□ -1.29
SFPQ-208	ENST00000485365	UBXN11	Q5T124	520 aa		6.99	□□□□□ -1.29
SFPQ-208	ENST00000485365	NLGN1	Q8N2Q7	840 aa		6.99	□□□□□ -1.29
SFPQ-208	ENST00000485365	TMEM74	Q96NL1	305 aa		6.99	□□□□□ -1.29
SFPQ-208	ENST00000485365	IMPACT	Q9P2X3	320 aa		6.99	□□□□□ -1.29
SFPQ-208	ENST00000485365	ARHGEF5	Q12774	1597 aa		6.99	□□□□□ -1.29
SFPQ-208	ENST00000485365		A0A1B0GTL3	188 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	ZNF205	O95201	554 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	PFKL	P17858	780 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	ENDOU	P21128	410 aa	Known RBP	6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	POLR2B	P30876	1174 aa	Known RBP	6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	MAPKAPK2	P49137	400 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	ZC3H14	Q6PJT7	736 aa	Known RBP	6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	LIPI	Q6XZB0	460 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	FERMT3	Q86UX7	667 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	ADGRG2	Q8IZP9	1017 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	JMJD8	Q96S16	334 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	CDADC1	Q9BWV3	514 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	CHST7	Q9NS84	486 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	PARP2	Q9UGN5	583 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	PALD1	Q9ULE6	856 aa		6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	INO80	Q9ULG1	1556 aa	Predicted RBP	6.98	□□□□□ -1.29
SFPQ-208	ENST00000485365	AKAP8	O43823	692 aa	Known RBP	6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	PLA2G1B	P04054	148 aa	Known RBP	6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	MSL3P1	P0C860	447 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	FBLN1	P23142	703 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	GBP2	P32456	591 aa	Predicted RBP	6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	FAM160A1	Q05DH4	1040 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	NR1I3	Q14994	352 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	ZNF827	Q17R98	1081 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	SNAP47	Q5SQN1	464 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	NT5DC1	Q5TFE4	455 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	LSR	Q86X29	649 aa	Predicted RBP	6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	RERE	Q9P2R6	1566 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	SUSD2	Q9UGT4	822 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	TCOF1	Q13428	1488 aa	Known RBP	6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	LMTK3	Q96Q04	1460 aa		6.97	□□□□□ -1.29
SFPQ-208	ENST00000485365	TNR	Q92752	1358 aa		6.96	□□□□□ -1.29
SFPQ-208	ENST00000485365	NCOA1	Q15788	1441 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	TNFRSF1A	P19438	455 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	GART	P22102	1010 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	BMP8B	P34820	402 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	CTSK	P43235	329 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	MAGEA10	P43363	369 aa	Predicted RBP	6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	DAB2	P98082	770 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	EAPP	Q56P03	285 aa	Predicted RBP	6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	THEMIS	Q8N1K5	641 aa	Predicted RBP	6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	GOLM1	Q8NBJ4	401 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	TMEM52	Q8NDY8	209 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	FNIP1	Q8TF40	1166 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	EAF1	Q96JC9	268 aa	Predicted RBP	6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	SPATA25	Q9BR10	227 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	USP40	Q9NVE5	1235 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	GMIP	Q9P107	970 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	CLTC	Q00610	1675 aa	Known RBP	6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	ADGB	Q8N7X0	1667 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	DUOX2	Q9NRD8	1548 aa		6.96	□□□□□ -1.3
SFPQ-208	ENST00000485365	PTPRK	Q15262	1439 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	ANKRD50	Q9ULJ7	1429 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	MEIS1	O00470	390 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	MVK	Q03426	396 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	RAD51AP2	Q09MP3	1159 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	PSMD2	Q13200	908 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	OVOS1	Q6IE37	1185 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	FAM196A	Q6ZSG2	479 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	RSRP1	Q9BUV0	290 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	AP5S1	Q9NUS5	200 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	PLA2G2D	Q9UNK4	145 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	NUP155	O75694	1391 aa		6.95	□□□□□ -1.3
SFPQ-208	ENST00000485365	TLR3	O15455	904 aa	Known RBP	6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	ADAM17	P78536	824 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	HTRA3	P83110	453 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	ZXDA	P98168	799 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	TARBP2	Q15633	366 aa	Known RBP	6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	SAPCD2	Q86UD0	394 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	RELL1	Q8IUW5	271 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	GFOD1	Q9NXC2	390 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	HCFC2	Q9Y5Z7	792 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	PLXNC1	O60486	1568 aa		6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
SFPQ-208	ENST00000485365	C3	P01024	1663 aa		6.93	□□□□□ -1.3
SFPQ-208	ENST00000485365	ERBIN	Q96RT1	1412 aa		6.93	□□□□□ -1.3
SFPQ-208	ENST00000485365	SHANK2	Q9UPX8	1470 aa		6.93	□□□□□ -1.3
SFPQ-208	ENST00000485365	KDM5D	Q9BY66	1539 aa		6.93	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms