RNA–Protein interactions for RNA: ENST00000484393.1

MACF1-218, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-218ENST00000484393 USP40Q9NVE5 1235 aa7.17□□□□□ -1.26
MACF1-218ENST00000484393 AATFQ9NY61 560 aaKnown RBP eCLIP7.17□□□□□ -1.26
MACF1-218ENST00000484393 PTCH2Q9Y6C5 1203 aa7.17□□□□□ -1.26
MACF1-218ENST00000484393 COMMD10Q9Y6G5 202 aa7.17□□□□□ -1.26
MACF1-218ENST00000484393 GAKO14976 1311 aa7.17□□□□□ -1.26
MACF1-218ENST00000484393 ZNF532Q9HCE3 1301 aa7.17□□□□□ -1.26
MACF1-218ENST00000484393 SSC5DA1L4H1 1573 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 HTTP42858 3142 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 TMEM229AB2RXF0 380 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 LDHCP07864 332 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 RASA1P20936 1047 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 NF2P35240 595 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 RGS3P49796 1198 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 MMP14P50281 582 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 DYNLL1P63167 89 aaKnown RBP7.16□□□□□ -1.26
MACF1-218ENST00000484393 NFIAQ12857 509 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 PRKG1Q13976 671 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 LRIT3Q3SXY7 679 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 C4orf17Q53FE4 359 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 RNFT1Q5M7Z0 435 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 APOBEC3HQ6NTF7 200 aaKnown RBP7.16□□□□□ -1.26
MACF1-218ENST00000484393 CDC42EP5Q6NZY7 148 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 TSHZ1Q6ZSZ6 1077 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 ARMC9Q7Z3E5 817 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 SH3RF3Q8TEJ3 882 aaPredicted RBP7.16□□□□□ -1.26
MACF1-218ENST00000484393 RILPL2Q969X0 211 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 ZNF358Q9NW07 568 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 PPP4R2Q9NY27 417 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 KIAA1024Q9UPX6 916 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 DYRK1BQ9Y463 629 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 LAMA3Q16787 3333 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 VCANP13611 3396 aa7.16□□□□□ -1.26
MACF1-218ENST00000484393 SPTBN5Q9NRC6 3674 aaKnown RBP7.15□□□□□ -1.26
MACF1-218ENST00000484393 PTPRFP10586 1907 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 GPR75-ASB3A0A0A6YYF3 556 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 ANKRD33BA6NCL7 494 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 MBD4O95243 580 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 BAG3O95817 575 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 RECKO95980 971 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 ATP2B1P20020 1258 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 BMP8BP34820 402 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 TNNI2P48788 182 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 SMTNP53814 917 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 CLDN10P78369 228 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 FOXD4Q12950 439 aaPredicted RBP7.15□□□□□ -1.26
MACF1-218ENST00000484393 CRHR2Q13324 411 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 TNFAIP1Q13829 316 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 RASA3Q14644 834 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 TEX11Q8IYF3 940 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 LCORLQ8N3X6 602 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 KBTBD3Q8NAB2 608 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 SH3TC2Q8TF17 1288 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 TRERF1Q96PN7 1200 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 TMEM39BQ9GZU3 492 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 DEFB129Q9H1M3 183 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 FZD1Q9UP38 647 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 HRH3Q9Y5N1 445 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 RPTORQ8N122 1335 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 RFX7Q2KHR2 1363 aa7.15□□□□□ -1.26
MACF1-218ENST00000484393 PHIPQ8WWQ0 1821 aa7.15□□□□□ -1.27
MACF1-218ENST00000484393 TCRBV5S4A2TA0A5A2 114 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 A6NJY4 79 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 IGF2BP3O00425 579 aaKnown RBP eCLIP7.14□□□□□ -1.27
MACF1-218ENST00000484393 ADD2P35612 726 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 USP5P45974 858 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 RHBDL3P58872 404 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 CAP1Q01518 475 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 MYBPC2Q14324 1141 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 TSNAXIP1Q2TAA8 658 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 CCDC144BQ3MJ40 725 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 TTC22Q5TAA0 569 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 NBPF12Q5TAG4 269 aaPredicted RBP7.14□□□□□ -1.27
MACF1-218ENST00000484393 ZSCAN25Q6NSZ9 544 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 UBE2Q1Q7Z7E8 422 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 MAPKAPK5Q8IW41 473 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 ZSCAN29Q8IWY8 852 aaPredicted RBP7.14□□□□□ -1.27
MACF1-218ENST00000484393 PGBD3Q8N328 593 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 TGFBRAP1Q8WUH2 860 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 PIK3R5Q8WYR1 880 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 EVI5LQ96CN4 794 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 SHISA4Q96DD7 197 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 MRIQ9BWK5 157 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 ARMT1Q9H993 441 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 DDX4Q9NQI0 724 aaKnown RBP7.14□□□□□ -1.27
MACF1-218ENST00000484393 SAP30BPQ9UHR5 308 aaKnown RBP7.14□□□□□ -1.27
MACF1-218ENST00000484393 PNMA2Q9UL42 364 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 MYH4Q9Y623 1939 aa7.14□□□□□ -1.27
MACF1-218ENST00000484393 RPAP1Q9BWH6 1393 aaPredicted RBP7.13□□□□□ -1.27
MACF1-218ENST00000484393 FLT1P17948 1338 aa7.13□□□□□ -1.27
MACF1-218ENST00000484393 A0A1B0GTH6 734 aa7.13□□□□□ -1.27
MACF1-218ENST00000484393 SOWAHDA6NJG2 315 aa7.13□□□□□ -1.27
MACF1-218ENST00000484393 M0R2C6 588 aa7.13□□□□□ -1.27
MACF1-218ENST00000484393 RNF113AO15541 343 aaKnown RBP7.13□□□□□ -1.27
MACF1-218ENST00000484393 WDHD1O75717 1129 aaPredicted RBP7.13□□□□□ -1.27
MACF1-218ENST00000484393 F11P03951 625 aa7.13□□□□□ -1.27
MACF1-218ENST00000484393 ZBTB48P10074 688 aaPredicted RBP7.13□□□□□ -1.27
MACF1-218ENST00000484393 GSPT1P15170 499 aaKnown RBP7.13□□□□□ -1.27
MACF1-218ENST00000484393 PAX3P23760 479 aa7.13□□□□□ -1.27
MACF1-218ENST00000484393 C4orf46Q504U0 113 aa7.13□□□□□ -1.27
MACF1-218ENST00000484393 LDLRAD1Q5T700 205 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms