RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 USP17L5A8MUK1 530 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 CXCL11O14625 94 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 GPAA1O43292 621 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 CAP2P40123 477 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 CTCFP49711 727 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-207ENST00000483969 PPIL2Q13356 520 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 SNAPC2Q13487 334 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 MCMDC2Q4G0Z9 681 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 ZHX2Q9Y6X8 837 aa10.64□□□□□ -0.71
COL8A1-207ENST00000483969 FAM196BA6NMK8 535 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 GSG1L2A8MUP6 293 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 C1QTNF9BB2RNN3 333 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 USP17L12C9JPN9 530 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 USP17L21D6R901 530 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 ASNSP08243 561 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 CETPP11597 493 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 PTPRAP18433 802 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 SDSP20132 328 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 TXLNAP40222 546 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 PLCD1P51178 756 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 EPHA4P54764 986 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
COL8A1-207ENST00000483969 PCBP4P57723 403 aaKnown RBP10.63□□□□□ -0.71
COL8A1-207ENST00000483969 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 C12orf60Q5U649 245 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 TATDN1Q6P1N9 297 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 CD163Q86VB7 1156 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 TRIM50Q86XT4 487 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 ZDHHC1Q8WTX9 485 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 SEC62Q99442 399 aaKnown RBP10.63□□□□□ -0.71
COL8A1-207ENST00000483969 AS3MTQ9HBK9 375 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 RNF186Q9NXI6 227 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 SAGE1Q9NXZ1 904 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 ARPP21Q9UBL0 812 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-207ENST00000483969 SWAP70Q9UH65 585 aa10.63□□□□□ -0.71
COL8A1-207ENST00000483969 CCL15-CCL14A0A0B4J2E2 113 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 M0R2C6 588 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 FOXN1O15353 648 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 TRPA1O75762 1119 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 TDO2P48775 406 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 CCL15Q16663 113 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 CERKLQ49MI3 558 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-207ENST00000483969 SBK1Q52WX2 424 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 XP32Q5T750 250 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 TTC22Q5TAA0 569 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 CTR9Q6PD62 1173 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 SLC9A9Q8IVB4 645 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 IFNL3Q8IZI9 196 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL8A1-207ENST00000483969 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 DIAPH3Q9NSV4 1193 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
COL8A1-207ENST00000483969 ELOA3CA0A087WX78 387 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-207ENST00000483969 ELOA3DA6NLF2 546 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-207ENST00000483969 MINDY4BA8MYZ0 360 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 EML1O00423 815 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 SLC3A2P08195 630 aaKnown RBP10.61□□□□□ -0.71
COL8A1-207ENST00000483969 FURINP09958 794 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 CHRNA4P43681 627 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 GABPAQ06546 454 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-207ENST00000483969 ABCB5Q2M3G0 1257 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 ELOA3BQ3SY89 546 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 FASTKD5Q7L8L6 764 aaKnown RBP10.61□□□□□ -0.71
COL8A1-207ENST00000483969 ELOA3Q8NG57 546 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 CCDC17Q96LX7 622 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 NAPBQ9H115 298 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 KCNH4Q9UQ05 1017 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 AFG3L2Q9Y4W6 797 aa10.61□□□□□ -0.71
COL8A1-207ENST00000483969 CYP2D6P10635 497 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 NOS2P35228 1153 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 SPP2Q13103 211 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
COL8A1-207ENST00000483969 ZNF280CQ8ND82 737 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 RUFY2Q8WXA3 655 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 BRI3BPQ8WY22 251 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 FAM227BQ96M60 508 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 WDR18Q9BV38 432 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 MKNK2Q9HBH9 465 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 ZCCHC17Q9NP64 241 aaKnown RBP10.6□□□□□ -0.71
COL8A1-207ENST00000483969 PRDM10Q9NQV6 1147 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 ZNF232Q9UNY5 417 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 AKAP11Q9UKA4 1901 aa10.6□□□□□ -0.71
COL8A1-207ENST00000483969 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 SPDYE3A6NKU9 549 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 MPHOSPH10O00566 681 aaKnown RBP10.59□□□□□ -0.71
COL8A1-207ENST00000483969 RAD21O60216 631 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 GH2P01242 217 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 SPATA31C1P0DKV0 1188 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 HSPA8P11142 646 aaKnown RBP10.59□□□□□ -0.71
COL8A1-207ENST00000483969 GSPT1P15170 499 aaKnown RBP10.59□□□□□ -0.71
COL8A1-207ENST00000483969 ALAS2P22557 587 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 SHMT1P34896 483 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 CDK8P49336 464 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 ATP1A2P50993 1020 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 LBX1P52954 281 aa10.59□□□□□ -0.71
COL8A1-207ENST00000483969 ALX1Q15699 326 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms