RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SPAG5Q96R06 1193 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 NOD2Q9HC29 1040 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 BAIAP2L1Q9UHR4 511 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 SAR1BQ9Y6B6 198 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
SEC61A1-205ENST00000483956 E7EVH7 732 aa12.83□□□□□ -0.35
SEC61A1-205ENST00000483956 PDE2AO00408 941 aaPredicted RBP12.83□□□□□ -0.35
SEC61A1-205ENST00000483956 IL2RBP14784 551 aa12.83□□□□□ -0.35
SEC61A1-205ENST00000483956 CAGE1Q8TC20 777 aa12.83□□□□□ -0.35
SEC61A1-205ENST00000483956 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.35
SEC61A1-205ENST00000483956 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.35
SEC61A1-205ENST00000483956 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 ZNF185O15231 689 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 MGRN1O60291 552 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 PDE8AO60658 829 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 COQ9O75208 318 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 ATP6V1G2O95670 118 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 SEC23AQ15436 765 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 PKN1Q16512 942 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 RRP12Q5JTH9 1297 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 KDM7AQ6ZMT4 941 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 TOM1L2Q6ZVM7 507 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 CMTR1Q8N1G2 835 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 PYM1Q9BRP8 204 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 IQSEC3Q9UPP2 1182 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 CTNND2Q9UQB3 1225 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 CLSTN1O94985 981 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 STARD3NLO95772 234 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 FAM107AO95990 144 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 SLC5A1P13866 664 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 SCTRP47872 440 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 FUT2Q10981 343 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 HLFQ16534 295 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 SMYD4Q8IYR2 804 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 LCORLQ8N3X6 602 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 CCDC82Q8N4S0 544 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 CYFIP2Q96F07 1278 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 UBAC1Q9BSL1 405 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 EBF2Q9HAK2 575 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 GGA2Q9UJY4 613 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 G3BP2Q9UN86 482 aaKnown RBP12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 TFR2Q9UP52 801 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 SLC4A4Q9Y6R1 1079 aa12.83□□□□□ -0.36
SEC61A1-205ENST00000483956 DLEC1Q9Y238 1755 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 NUP98P52948 1817 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 PRPF3O43395 683 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 PRKAB2O43741 272 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 HSF2BPO75031 334 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 IFFO1Q0D2I5 559 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 TNFRSF25Q93038 417 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 ANAPC4Q9UJX5 808 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 XDHP47989 1333 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 N4BP3O15049 544 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 RTN3O95197 1032 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 CASP1P29466 404 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 COPB1P53618 953 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 EARS2Q5JPH6 523 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 NUP133Q8WUM0 1156 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 ZIM3Q96PE6 472 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 DMGDHQ9UI17 866 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 C15orf41Q9Y2V0 281 aa12.82□□□□□ -0.36
SEC61A1-205ENST00000483956 CCT6AP40227 531 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 XRCC4Q13426 336 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 CUL5Q93034 780 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 LMCD1Q9NZU5 365 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 VPS54Q9P1Q0 977 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 L3MBTL1Q9Y468 752 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 PSMD14O00487 310 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 ELF3P78545 371 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 CKAP4Q07065 602 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 PPARAQ07869 468 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 PAK1Q13153 545 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 TCP11X2Q5H9J9 407 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 PDXDC2PQ6P474 469 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 ZNF570Q96NI8 536 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 TNKSO95271 1327 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
SEC61A1-205ENST00000483956 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 KIF4AO95239 1232 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 ANP32DO95626 131 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 NR1D1P20393 614 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 ALS2CLQ60I27 953 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 SLC30A9Q6PML9 568 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 PIK3R5Q8WYR1 880 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 ESR2Q92731 530 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 NUP88Q99567 741 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 PCDHGC5Q9Y5F6 944 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms