RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 HOOK2Q96ED9 719 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 PAG1Q9NWQ8 432 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 ECE1P42892 770 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 PLS1Q14651 629 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.63
COL12A1-207ENST00000483888 LZICQ8WZA0 190 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 EPC1Q9H2F5 836 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 MLH1P40692 756 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 GABPAQ06546 454 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 CYTH1Q15438 398 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 ATG16L1Q676U5 607 aa11.13□□□□□ -0.63
COL12A1-207ENST00000483888 GTPBP10A4D1E9 387 aaKnown RBP11.13□□□□□ -0.63
COL12A1-207ENST00000483888 CHMP6Q96FZ7 201 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 UBTFL6P0CB48 400 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 SPARCL1Q14515 664 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 ME3Q16798 604 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 BRD8Q9H0E9 1235 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 COPG1Q9Y678 874 aaKnown RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 GNAQP50148 359 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM11Q96F44 468 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 MOCS3O95396 460 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 TATP17735 454 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 SLC20A2Q08357 652 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 DCUN1D2Q6PH85 259 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 OPTNQ96CV9 577 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 ZMYM3Q14202 1370 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 PGRMC1O00264 195 aaKnown RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 MDM2Q00987 491 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 ARID5BQ14865 1188 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 BSPRYQ5W0U4 402 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 CC2D2BQ6DHV5 1058 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 C6orf50Q9HD87 102 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 CCDC87Q9NVE4 849 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 SESN1Q9Y6P5 492 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 DAB2IPQ5VWQ8 1189 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 PPP1R14BQ96C90 147 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 GOLGA8IPA6NC78 632 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 MED21Q13503 144 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 LSM1O15116 133 aaKnown RBP11.12□□□□□ -0.63
COL12A1-207ENST00000483888 KIRREL3Q8IZU9 778 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 DACH2Q96NX9 599 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 CCT8L2Q96SF2 557 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 NOD2Q9HC29 1040 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 SERTAD1Q9UHV2 236 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 RNF123Q5XPI4 1314 aa11.12□□□□□ -0.63
COL12A1-207ENST00000483888 H3BRJ5 948 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 CYP4F22Q6NT55 531 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 CATSPER3Q86XQ3 398 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM59Q8IWR1 403 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 DTX3LQ8TDB6 740 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 RNF14Q9UBS8 474 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 TOM1L1O75674 476 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 ANP32DO95626 131 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 IGBP1P78318 339 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 SPATA1Q5VX52 437 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 DDHD1Q8NEL9 900 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 TGS1Q96RS0 853 aaKnown RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 TESK2Q96S53 571 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 CCDC90BQ9GZT6 254 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 SMARCA4P51532 1647 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 MRPS25P82663 173 aaKnown RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 MFN1Q8IWA4 741 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 MSH6P52701 1360 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 GJA8P48165 433 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 HORMAD1Q86X24 394 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 STAMQ92783 540 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 NR1H4Q96RI1 486 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 EXOC1LA0A1B0GW35 172 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 RETREG2Q8NC44 543 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 ATP6V1G3Q96LB4 118 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 CACYBPQ9HB71 228 aaKnown RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 MTMR6Q9Y217 621 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 STAT1P42224 750 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 TOGARAM2Q6ZUX3 1019 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 CATSPER1Q8NEC5 780 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 PSPC1Q8WXF1 523 aaKnown RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 PHKBQ93100 1093 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 PANX2Q96RD6 677 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM55Q9BYV6 548 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 PDP2Q9P2J9 529 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 GNA14O95837 355 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 ATF7P17544 494 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-207ENST00000483888 DPCR1Q3MIW9 517 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 CCDC103Q8IW40 242 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 SLC26A7Q8TE54 656 aa11.11□□□□□ -0.63
COL12A1-207ENST00000483888 A0A1B0GW55 424 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 GSTA4O15217 222 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DUX4L2P0CJ85 424 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DUX4L3P0CJ86 424 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DUX4L4P0CJ87 422 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DUX4L5P0CJ88 424 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DUX4L6P0CJ89 424 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms