RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TRIML1Q8N9V2 468 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 ZNF280CQ8ND82 737 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 ERCC4Q92889 916 aaPredicted RBP29.68■■■□□ 2.34
SHOX2-204ENST00000483851 SLF1Q9BQI6 1058 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 SSC5DA1L4H1 1573 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 ABCB11O95342 1321 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 CYP3A7-CYP3A51PA0A087WV96 503 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 C19orf81C9J6K1 198 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 CYP3A7P24462 503 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 BACE1P56817 501 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 USP50Q70EL3 339 aaPredicted RBP29.68■■■□□ 2.34
SHOX2-204ENST00000483851 SPATA20Q8TB22 786 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 CRYGNQ8WXF5 182 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 PCDHA5Q9Y5H7 936 aa29.68■■■□□ 2.34
SHOX2-204ENST00000483851 SPDYE3A6NKU9 549 aa29.67■■■□□ 2.34
SHOX2-204ENST00000483851 UBA7P41226 1012 aa29.67■■■□□ 2.34
SHOX2-204ENST00000483851 SARSP49591 514 aaKnown RBP29.67■■■□□ 2.34
SHOX2-204ENST00000483851 FXR2P51116 673 aaKnown RBP eCLIP29.67■■■□□ 2.34
SHOX2-204ENST00000483851 IQCB1Q15051 598 aa29.67■■■□□ 2.34
SHOX2-204ENST00000483851 C11orf57Q6ZUT1 292 aaPredicted RBP29.67■■■□□ 2.34
SHOX2-204ENST00000483851 SULF1Q8IWU6 871 aa29.67■■■□□ 2.34
SHOX2-204ENST00000483851 ZC3H15Q8WU90 426 aaKnown RBP29.67■■■□□ 2.34
SHOX2-204ENST00000483851 C12orf42Q96LP6 360 aa29.67■■■□□ 2.34
SHOX2-204ENST00000483851 RAB34Q9BZG1 259 aa29.67■■■□□ 2.34
SHOX2-204ENST00000483851 OPLAHO14841 1288 aa29.66■■■□□ 2.34
SHOX2-204ENST00000483851 SMC2O95347 1197 aa29.66■■■□□ 2.34
SHOX2-204ENST00000483851 PDIA5Q14554 519 aa29.66■■■□□ 2.34
SHOX2-204ENST00000483851 POTEDQ86YR6 584 aa29.66■■■□□ 2.34
SHOX2-204ENST00000483851 IGSF22Q8N9C0 903 aa29.66■■■□□ 2.34
SHOX2-204ENST00000483851 MBOAT7Q96N66 472 aa29.66■■■□□ 2.34
SHOX2-204ENST00000483851 GRIN3BO60391 1043 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 TDP2O95551 362 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 MTMR2Q13614 643 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 TMEM266Q2M3C6 531 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 PRAMEF18Q5VWM3 479 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 LUZP1Q86V48 1076 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 EMILIN3Q9NT22 766 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 DDX25Q9UHL0 483 aaKnown RBP29.65■■■□□ 2.34
SHOX2-204ENST00000483851 ICAM1P05362 532 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 SREBF1P36956 1147 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 SPP2Q13103 211 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.65■■■□□ 2.34
SHOX2-204ENST00000483851 SMARCE1Q969G3 411 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 ZKSCAN4Q969J2 545 aaPredicted RBP29.65■■■□□ 2.34
SHOX2-204ENST00000483851 CUEDC2Q9H467 287 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 DISC1Q9NRI5 854 aa29.65■■■□□ 2.34
SHOX2-204ENST00000483851 VCAM1P19320 739 aa29.64■■■□□ 2.34
SHOX2-204ENST00000483851 PAGE5Q96GU1 130 aa29.64■■■□□ 2.34
SHOX2-204ENST00000483851 FBXO28Q9NVF7 368 aa29.64■■■□□ 2.34
SHOX2-204ENST00000483851 PHIPQ8WWQ0 1821 aa29.64■■■□□ 2.34
SHOX2-204ENST00000483851 DPCR1Q3MIW9 517 aa29.63■■■□□ 2.33
SHOX2-204ENST00000483851 MAGEF1Q9HAY2 307 aa29.63■■■□□ 2.33
SHOX2-204ENST00000483851 GOLGA6L19H0YKK7 550 aa29.63■■■□□ 2.33
SHOX2-204ENST00000483851 SLC37A4O43826 429 aa29.63■■■□□ 2.33
SHOX2-204ENST00000483851 PDXDC2PQ6P474 469 aa29.63■■■□□ 2.33
SHOX2-204ENST00000483851 CCDC174Q6PII3 467 aa29.63■■■□□ 2.33
SHOX2-204ENST00000483851 LDHDQ86WU2 507 aa29.63■■■□□ 2.33
SHOX2-204ENST00000483851 USP2O75604 605 aaPredicted RBP29.62■■■□□ 2.33
SHOX2-204ENST00000483851 ARHGAP4P98171 946 aa29.62■■■□□ 2.33
SHOX2-204ENST00000483851 GPR162Q16538 588 aa29.62■■■□□ 2.33
SHOX2-204ENST00000483851 SAMD3Q8N6K7 520 aa29.62■■■□□ 2.33
SHOX2-204ENST00000483851 PPP1R9AQ9ULJ8 1098 aa29.62■■■□□ 2.33
SHOX2-204ENST00000483851 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.61■■■□□ 2.33
SHOX2-204ENST00000483851 BECN2A8MW95 431 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 GCOM1H8Y6P7 765 aaPredicted RBP29.61■■■□□ 2.33
SHOX2-204ENST00000483851 FOXN1O15353 648 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 OFD1O75665 1012 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 MYL1P05976 194 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 CYP3A4P08684 503 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 POLR2MP0CAP2 368 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 CIITAP33076 1130 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 GSDMAQ96QA5 445 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.61■■■□□ 2.33
SHOX2-204ENST00000483851 ZHX2Q9Y6X8 837 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 BIN1O00499 593 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 TBX3O15119 743 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 PTMAP06454 111 aaKnown RBP29.61■■■□□ 2.33
SHOX2-204ENST00000483851 STAT6P42226 847 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 RRAGBQ5VZM2 374 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 TANGO6Q9C0B7 1094 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 EHMT1Q9H9B1 1298 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 SLC38A10Q9HBR0 1119 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 SCN4AP35499 1836 aa29.61■■■□□ 2.33
SHOX2-204ENST00000483851 GLTPD2A6NH11 291 aa29.6■■■□□ 2.33
SHOX2-204ENST00000483851 PPP1R12BO60237 982 aaPredicted RBP29.6■■■□□ 2.33
SHOX2-204ENST00000483851 TECP42680 631 aa29.6■■■□□ 2.33
SHOX2-204ENST00000483851 TXKP42681 527 aa29.6■■■□□ 2.33
SHOX2-204ENST00000483851 MAP3K9P80192 1104 aa29.6■■■□□ 2.33
SHOX2-204ENST00000483851 SEMA3FQ13275 785 aa29.6■■■□□ 2.33
SHOX2-204ENST00000483851 CT47A1Q5JQC4 288 aaPredicted RBP29.6■■■□□ 2.33
SHOX2-204ENST00000483851 CABP7Q86V35 215 aa29.6■■■□□ 2.33
SHOX2-204ENST00000483851 DACH1Q9UI36 760 aa29.6■■■□□ 2.33
SHOX2-204ENST00000483851 SLC26A4O43511 780 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 GHRHRQ02643 423 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 Q4G0T1 1027 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 DHX40Q8IX18 779 aaKnown RBP29.59■■■□□ 2.33
SHOX2-204ENST00000483851 MLKLQ8NB16 471 aa29.59■■■□□ 2.33
SHOX2-204ENST00000483851 RBM46Q8TBY0 533 aaKnown RBP29.59■■■□□ 2.33
SHOX2-204ENST00000483851 RPAP3Q9H6T3 665 aaPredicted RBP29.59■■■□□ 2.33
SHOX2-204ENST00000483851 MAP3K20Q9NYL2 800 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms