RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 FDX1P10109 184 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 PFKFB1P16118 471 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 HOXA13P31271 388 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-226ENST00000483656 ZNF445P59923 1031 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 GHRHRQ02643 423 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 FAM160A1Q05DH4 1040 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 AP3B2Q13367 1082 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 LETM2Q2VYF4 491 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 CCDC183Q5T5S1 534 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 USP49Q70CQ1 688 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
HDAC6-226ENST00000483656 ANO3Q9BYT9 981 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 CSRNP2Q9H175 543 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 NFIBO00712 420 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 CCNT1O60563 726 aaKnown RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 CELF2O95319 508 aaKnown RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 TDP2O95551 362 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 FOSP01100 380 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 FKBP1BP68106 108 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 MUM1L1Q5H9M0 696 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 CST9Q5W186 159 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 GPAT2Q6NUI2 795 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 CHADLQ6NUI6 762 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 GADL1Q6ZQY3 521 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 CCDC73Q6ZRK6 1079 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 GAS2L3Q86XJ1 694 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 TEX2Q8IWB9 1127 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 PROCA1Q8NCQ7 364 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 FERMT2Q96AC1 680 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 CLSTN2Q9H4D0 955 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 GBA2Q9HCG7 927 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 DDX19AQ9NUU7 478 aaKnown RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-226ENST00000483656 RIPK3Q9Y572 518 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
HDAC6-226ENST00000483656 SYCE3A1L190 88 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 GCOM1H8Y6P7 765 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-226ENST00000483656 ATP2A1O14983 1001 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 SLC37A4O43826 429 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 CFBP00751 764 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 POLR2MP0CAP2 368 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 ALAS1P13196 640 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 SREBF1P36956 1147 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 HSD17B4P51659 736 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 OAZ1P54368 228 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 ORC2Q13416 577 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-226ENST00000483656 GSE1Q14687 1217 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 ARL6IP4Q66PJ3 421 aaKnown RBP11.48□□□□□ -0.57
HDAC6-226ENST00000483656 PPP4R3AQ6IN85 833 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-226ENST00000483656 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 MTMR9Q96QG7 549 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
HDAC6-226ENST00000483656 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 CYP3A7-CYP3A51PA0A087WV96 503 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 VWA3AA6NCI4 1184 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 LAD1O00515 517 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 NEMFO60524 1076 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 PEX10O60683 326 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 ZNF202O95125 648 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 CYP3A4P08684 503 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 OR52Z1P0C646 297 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 CYP3A7P24462 503 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 PRPHP41219 470 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 USP11P51784 963 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 ARHGAP4P98171 946 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 CAMK4Q16566 473 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 LBX2Q6XYB7 198 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
HDAC6-226ENST00000483656 FCHSD1Q86WN1 690 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 POTEDQ86YR6 584 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 C2orf69Q8N8R5 385 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 EPSTI1Q96J88 318 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 NUP62CLQ9H1M0 184 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 PNMA2Q9UL42 364 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
HDAC6-226ENST00000483656 COL11A1P12107 1806 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-226ENST00000483656 A0A087X0B3 334 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 SPDYE3A6NKU9 549 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 CNMDO75829 334 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 CIITAP33076 1130 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 SYKP43405 635 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 APLP1P51693 650 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 MOXD1Q6UVY6 613 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 SYTL5Q8TDW5 730 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-226ENST00000483656 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.57
HDAC6-226ENST00000483656 HAS1Q92839 578 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
HDAC6-226ENST00000483656 FUCA2Q9BTY2 467 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms