RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 ABCB11O95342 1321 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 TCHHQ07283 1943 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 FDX1P10109 184 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 FKBP1BP68106 108 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 MAP3K11Q16584 847 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 JAKMIP3Q5VZ66 844 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 GADL1Q6ZQY3 521 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 CCDC73Q6ZRK6 1079 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 SHISA4Q96DD7 197 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 SLC10A4Q96EP9 437 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 BIN2Q9UBW5 565 aaPredicted RBP14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 MRPL11Q9Y3B7 192 aaKnown RBP14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 OTOFQ9HC10 1997 aa14.22□□□□□ -0.13
TSPAN1-208ENST00000482928 SPDYE5A6NIY4 337 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 UNCXA6NJT0 531 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L15C9J2P7 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L13C9JLJ4 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L11C9JVI0 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L18D6R9N7 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L22D6RA61 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L17D6RBQ6 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L19D6RCP7 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L20D6RJB6 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 PPP1R11O60927 126 aaPredicted RBP14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 GADD45BO75293 160 aaPredicted RBP14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 USP17L24Q0WX57 530 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 SLC39A14Q15043 492 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 MOB2Q70IA6 237 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 LINC00301Q8NCQ3 95 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 RASGRP4Q8TDF6 673 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 TNFRSF25Q93038 417 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 EHMT1Q9H9B1 1298 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 CCPG1Q9ULG6 757 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 PTPN22Q9Y2R2 807 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 NR2E3Q9Y5X4 410 aa14.21□□□□□ -0.13
TSPAN1-208ENST00000482928 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 CXCL11O14625 94 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 PPP6R2O75170 966 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 PPIL2Q13356 520 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 NPY5RQ15761 445 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 SH3D19Q5HYK7 790 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 CAVIN1Q6NZI2 390 aaKnown RBP14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 OPTNQ96CV9 577 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 CLMNQ96JQ2 1002 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 NAP1L4Q99733 375 aaKnown RBP14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 GZF1Q9H116 711 aaPredicted RBP14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 PPP1R9AQ9ULJ8 1098 aa14.2□□□□□ -0.14
TSPAN1-208ENST00000482928 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 ICAM1P05362 532 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 MARCKSP29966 332 aaPredicted RBP14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 MCM7P33993 719 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 AP3B2Q13367 1082 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 COG2Q14746 738 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 ZNF174Q15697 407 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 UBE2SQ16763 222 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 INF2Q27J81 1249 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 FASTKD5Q7L8L6 764 aaKnown RBP14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 NEK8Q86SG6 692 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 TEX2Q8IWB9 1127 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 CPXCR1Q8N123 301 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 KRI1Q8N9T8 703 aaKnown RBP14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 PROCA1Q8NCQ7 364 aaPredicted RBP14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 ZNF333Q96JL9 665 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 HOXC10Q9NYD6 342 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 PCDHB6Q9Y5E3 794 aa14.19□□□□□ -0.14
TSPAN1-208ENST00000482928 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 GCOM1H8Y6P7 765 aaPredicted RBP14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 CUTAO60888 179 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 FOSP01100 380 aaPredicted RBP14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 POLR2MP0CAP2 368 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 TOB1P50616 345 aaPredicted RBP14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 IRX3P78415 501 aaPredicted RBP14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 SNAPC2Q13487 334 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 LETM2Q2VYF4 491 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 MCF2L2Q86YR7 1114 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 CCAR1Q8IX12 1150 aaKnown RBP14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 GPT2Q8TD30 523 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 TBCKQ8TEA7 893 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 TMEM260Q9NX78 707 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 PCDHA7Q9UN72 937 aa14.18□□□□□ -0.14
TSPAN1-208ENST00000482928 MYPNQ86TC9 1320 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 A0A0G2JLL6 359 aaPredicted RBP14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 M0R2N6 131 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 IRF6O14896 467 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 MARCH6O60337 910 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 CCNT1O60563 726 aaKnown RBP14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 CFBP00751 764 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 ALAS1P13196 640 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 OSBPP22059 807 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 DSG3P32926 999 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 ORC2Q13416 577 aaPredicted RBP14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 EARS2Q5JPH6 523 aaKnown RBP14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 LDLRAD1Q5T700 205 aa14.17□□□□□ -0.14
TSPAN1-208ENST00000482928 ADALQ6DHV7 355 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms