RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 UPF3BQ9BZI7 483 aaKnown RBP9.04□□□□□ -0.96
SNX13-208ENST00000482558 BTG4Q9NY30 223 aa9.04□□□□□ -0.96
SNX13-208ENST00000482558 DBNLQ9UJU6 430 aaKnown RBP9.04□□□□□ -0.96
SNX13-208ENST00000482558 PCDHGB7Q9Y5F8 929 aa9.04□□□□□ -0.96
SNX13-208ENST00000482558 MAP3K15Q6ZN16 1313 aa9.04□□□□□ -0.96
SNX13-208ENST00000482558 DLL1O00548 723 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 SLC27A2O14975 620 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 GPR182O15218 404 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 TAF5LO75529 589 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 A1BGP04217 495 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 YBX3P16989 372 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNX13-208ENST00000482558 SERINC3Q13530 473 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 C4orf46Q504U0 113 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 ELMSAN1Q6PJG2 1045 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 TMEM130Q8N3G9 435 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 DSCC1Q9BVC3 393 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 AKTIPQ9H8T0 292 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 ZDHHC9Q9Y397 364 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 KIF3AQ9Y496 699 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 BCL9O00512 1426 aa9.03□□□□□ -0.96
SNX13-208ENST00000482558 OPLAHO14841 1288 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 STX6O43752 255 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 DEAF1O75398 565 aaPredicted RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 CSF1RP07333 972 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 ZSCAN22P10073 491 aaPredicted RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 RPS6KB1P23443 525 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 IL6STP40189 918 aaPredicted RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 PTH1RQ03431 593 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 IFIT5Q13325 482 aaKnown RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 ZSCAN25Q6NSZ9 544 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 ATG9AQ7Z3C6 839 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 PIGBQ92521 554 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 ZNF512BQ96KM6 892 aaPredicted RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 RNPC3Q96LT9 517 aaKnown RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 RPS6KC1Q96S38 1066 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 IL25Q9H293 177 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 PAG1Q9NWQ8 432 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 CTNNA3Q9UI47 895 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 WWC3Q9ULE0 1092 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 FNDC3AQ9Y2H6 1198 aaKnown RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 USP20Q9Y2K6 914 aa9.02□□□□□ -0.97
SNX13-208ENST00000482558 RTCBQ9Y3I0 505 aaKnown RBP9.02□□□□□ -0.97
SNX13-208ENST00000482558 ZNF609O15014 1411 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 ATF4P18848 351 aaPredicted RBP9.01□□□□□ -0.97
SNX13-208ENST00000482558 GNA15P30679 374 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 GJA8P48165 433 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 IRAK1P51617 712 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 GPLD1P80108 840 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 AMPD3Q01432 767 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 TJP1Q07157 1748 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 CCDC173Q0VFZ6 552 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 ZFYVE27Q5T4F4 411 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 ALG1LQ6GMV1 187 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 DHX32Q7L7V1 743 aaKnown RBP9.01□□□□□ -0.97
SNX13-208ENST00000482558 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
SNX13-208ENST00000482558 ALKBH8Q96BT7 664 aaKnown RBP9.01□□□□□ -0.97
SNX13-208ENST00000482558 FAM227BQ96M60 508 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 DBNDD2Q9BQY9 259 aa9.01□□□□□ -0.97
SNX13-208ENST00000482558 LLPHQ9BRT6 129 aaKnown RBP9.01□□□□□ -0.97
SNX13-208ENST00000482558 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
SNX13-208ENST00000482558 A0A0D9SFI3 127 aa9□□□□□ -0.97
SNX13-208ENST00000482558 ZBTB42B2RXF5 422 aa9□□□□□ -0.97
SNX13-208ENST00000482558 RNF113AO15541 343 aaKnown RBP9□□□□□ -0.97
SNX13-208ENST00000482558 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
SNX13-208ENST00000482558 CYP19A1P11511 503 aaPredicted RBP9□□□□□ -0.97
SNX13-208ENST00000482558 PAX3P23760 479 aa9□□□□□ -0.97
SNX13-208ENST00000482558 TTF1Q15361 905 aaPredicted RBP9□□□□□ -0.97
SNX13-208ENST00000482558 TRIP4Q15650 581 aaPredicted RBP9□□□□□ -0.97
SNX13-208ENST00000482558 ZSCAN23Q3MJ62 389 aa9□□□□□ -0.97
SNX13-208ENST00000482558 HS1BP3Q53T59 392 aa9□□□□□ -0.97
SNX13-208ENST00000482558 ODR4Q5SWX8 454 aa9□□□□□ -0.97
SNX13-208ENST00000482558 HS2ST1Q7LGA3 356 aa9□□□□□ -0.97
SNX13-208ENST00000482558 NME8Q8N427 588 aa9□□□□□ -0.97
SNX13-208ENST00000482558 FBXL16Q8N461 479 aa9□□□□□ -0.97
SNX13-208ENST00000482558 FAM184AQ8NB25 1140 aa9□□□□□ -0.97
SNX13-208ENST00000482558 KLHDC4Q8TBB5 520 aa9□□□□□ -0.97
SNX13-208ENST00000482558 SMARCC1Q92922 1105 aaPredicted RBP9□□□□□ -0.97
SNX13-208ENST00000482558 TRIM44Q96DX7 344 aaPredicted RBP9□□□□□ -0.97
SNX13-208ENST00000482558 NEUROD6Q96NK8 337 aa9□□□□□ -0.97
SNX13-208ENST00000482558 NEK1Q96PY6 1258 aa9□□□□□ -0.97
SNX13-208ENST00000482558 DDX24Q9GZR7 859 aaKnown RBP eCLIP9□□□□□ -0.976e-7■□□□□ 8.8
SNX13-208ENST00000482558 MRPL18Q9H0U6 180 aaKnown RBP9□□□□□ -0.97
SNX13-208ENST00000482558 SRA1Q9HD15 236 aaKnown RBP9□□□□□ -0.97
SNX13-208ENST00000482558 ARID1BQ8NFD5 2236 aaPredicted RBP9□□□□□ -0.97
SNX13-208ENST00000482558 TOGARAM1Q9Y4F4 1720 aa9□□□□□ -0.97
SNX13-208ENST00000482558 A0A1B0GUL7 405 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 ANKRD18BA2A2Z9 1011 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 A6NHS1 94 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 UBAP1LF5GYI3 381 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 GSC2O15499 205 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 F13A1P00488 732 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 IGHA2P01877 340 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 SYT1P21579 422 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 SSTR4P31391 388 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 PIP4K2AP48426 406 aaPredicted RBP8.99□□□□□ -0.97
SNX13-208ENST00000482558 NASPP49321 788 aaPredicted RBP8.99□□□□□ -0.97
SNX13-208ENST00000482558 UBE2HP62256 183 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 PKP1Q13835 747 aa8.99□□□□□ -0.97
SNX13-208ENST00000482558 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms