RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
LINC00888-203ENST00000482098 TTC6Q86TZ1 520 aa9.34□□□□□ -0.91
LINC00888-203ENST00000482098 BHMTQ93088 406 aa9.34□□□□□ -0.91
LINC00888-203ENST00000482098 SGSM3Q96HU1 749 aa9.34□□□□□ -0.91
LINC00888-203ENST00000482098 HDAC9Q9UKV0 1011 aa9.34□□□□□ -0.91
LINC00888-203ENST00000482098 RANBP2P49792 3224 aaKnown RBP9.33□□□□□ -0.92
LINC00888-203ENST00000482098 B2RBV5 119 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 TNFRSF10AO00220 468 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 PRC1O43663 620 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 GDF9O60383 454 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 BBOX1O75936 387 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 MYCLP1P12525 358 aaPredicted RBP9.33□□□□□ -0.92
LINC00888-203ENST00000482098 GUCY2CP25092 1073 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 RPS12P25398 132 aaKnown RBP9.33□□□□□ -0.92
LINC00888-203ENST00000482098 ARNTP27540 789 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 NCAPHQ15003 741 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 HLFQ16534 295 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 RASIP1Q5U651 963 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
LINC00888-203ENST00000482098 RUFY4Q6ZNE9 571 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 BSNDQ8WZ55 320 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 NINJ1Q92982 152 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 DCPSQ96C86 337 aaKnown RBP9.33□□□□□ -0.92
LINC00888-203ENST00000482098 MUC3BQ9H195 1237 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 MCM8Q9UJA3 840 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 PRR12Q9ULL5 1215 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 ABCC12Q96J65 1359 aa9.33□□□□□ -0.92
LINC00888-203ENST00000482098 CCDC163A0A0D9SF12 145 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 FAM177BA6PVY3 158 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 ALG1L2C9J202 215 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 SOX5P35711 763 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 TBX4P57082 545 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 PCDH1Q08174 1060 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 C21orf62-AS1Q17RA5 79 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 TM4SF20Q53R12 229 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 HGSNATQ68CP4 663 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 JAMLQ86YT9 394 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 SP8Q8IXZ3 490 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 ZSCAN1Q8NBB4 408 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 SPATA9Q9BWV2 254 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 RASSF4Q9H2L5 321 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 CAAP1Q9H8G2 361 aa9.32□□□□□ -0.92
LINC00888-203ENST00000482098 KCNQ3O43525 872 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 SMNDC1O75940 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
LINC00888-203ENST00000482098 RAD17O75943 681 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 B3GALT4O96024 378 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 GHRHP01286 108 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 MAPTP10636 758 aaKnown RBP9.31□□□□□ -0.92
LINC00888-203ENST00000482098 STAT3P40763 770 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 TNP2Q05952 138 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 WDR43Q15061 677 aaKnown RBP eCLIP9.31□□□□□ -0.92
LINC00888-203ENST00000482098 SLC10A5Q5PT55 438 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 DPP8Q6V1X1 898 aaPredicted RBP9.31□□□□□ -0.92
LINC00888-203ENST00000482098 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
LINC00888-203ENST00000482098 GAL3ST3Q96A11 431 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 C8orf48Q96LL4 319 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 MAP3K15Q6ZN16 1313 aa9.31□□□□□ -0.92
LINC00888-203ENST00000482098 GPR25O00155 361 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 PMLP29590 882 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 TM4SF4P48230 202 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
LINC00888-203ENST00000482098 CDKN1CP49918 316 aaPredicted RBP9.3□□□□□ -0.92
LINC00888-203ENST00000482098 GPLD1P80108 840 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 PCSK7Q16549 785 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 PARP10Q53GL7 1025 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 BRDTQ58F21 947 aaPredicted RBP9.3□□□□□ -0.92
LINC00888-203ENST00000482098 PERM1Q5SV97 790 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 RASAL3Q86YV0 1011 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 GRIN3AQ8TCU5 1115 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 PNISRQ8TF01 805 aaKnown RBP9.3□□□□□ -0.92
LINC00888-203ENST00000482098 EPN3Q9H201 632 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 NUDCQ9Y266 331 aa9.3□□□□□ -0.92
LINC00888-203ENST00000482098 POLR3KQ9Y2Y1 108 aaPredicted RBP9.3□□□□□ -0.92
LINC00888-203ENST00000482098 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 MEIS3P2A8K0S8 358 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 YDJCA8MPS7 323 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 FAM153BP0C7A2 387 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 U2AF1L5P0DN76 240 aaPredicted RBP9.29□□□□□ -0.92
LINC00888-203ENST00000482098 NFKB2Q00653 900 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 U2AF1Q01081 240 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00888-203ENST00000482098 MRM1Q6IN84 353 aaKnown RBP9.29□□□□□ -0.92
LINC00888-203ENST00000482098 VHLLQ6RSH7 139 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 DDX42Q86XP3 938 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00888-203ENST00000482098 ZNF34Q8IZ26 560 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 ZBTB38Q8NAP3 1195 aaPredicted RBP9.29□□□□□ -0.92
LINC00888-203ENST00000482098 TMEM40Q8WWA1 233 aa9.29□□□□□ -0.92
LINC00888-203ENST00000482098 POP1Q99575 1024 aaKnown RBP9.29□□□□□ -0.92
LINC00888-203ENST00000482098 SIPA1L3O60292 1781 aaPredicted RBP9.29□□□□□ -0.92
LINC00888-203ENST00000482098 COL6A3P12111 3177 aa9.28□□□□□ -0.92
LINC00888-203ENST00000482098 CEP290O15078 2479 aa9.28□□□□□ -0.92
LINC00888-203ENST00000482098 J3QW42 95 aa9.28□□□□□ -0.92
LINC00888-203ENST00000482098 HTATSF1O43719 755 aaKnown RBP9.28□□□□□ -0.92
LINC00888-203ENST00000482098 FKTNO75072 461 aa9.28□□□□□ -0.92
LINC00888-203ENST00000482098 NTSR2O95665 410 aa9.28□□□□□ -0.92
LINC00888-203ENST00000482098 ATP11AP98196 1134 aa9.28□□□□□ -0.92
LINC00888-203ENST00000482098 SUSD4Q5VX71 490 aa9.28□□□□□ -0.92
LINC00888-203ENST00000482098 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms