RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 RNF113AO15541 343 aaKnown RBP10.75□□□□□ -0.69
HLA-B-253ENST00000481849 MSCO60682 206 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 KRT37O76014 449 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 PGK2P07205 417 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 FCER1AP12319 257 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 BMP8BP34820 402 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 OLFML2BQ68BL8 750 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 APPBP2Q92624 585 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 MMP19Q99542 508 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
HLA-B-253ENST00000481849 SLC5A4Q9NY91 659 aa10.75□□□□□ -0.69
HLA-B-253ENST00000481849 FASNP49327 2511 aaKnown RBP10.75□□□□□ -0.69
HLA-B-253ENST00000481849 GPAA1O43292 621 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 PRDM1O75626 825 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 CCNYL3P0C7X3 344 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 RASA1P20936 1047 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 TDO2P48775 406 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 TDHQ8IZJ6 230 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 OTUD7AQ8TE49 926 aaPredicted RBP10.74□□□□□ -0.69
HLA-B-253ENST00000481849 CHMP4CQ96CF2 233 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 MAML3Q96JK9 1138 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 EPB41L4AQ9HCS5 686 aaPredicted RBP10.74□□□□□ -0.69
HLA-B-253ENST00000481849 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 PPP1R9AQ9ULJ8 1098 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 ATP11BQ9Y2G3 1177 aa10.74□□□□□ -0.69
HLA-B-253ENST00000481849 WDFY4Q6ZS81 3184 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 KBTBD13C9JR72 458 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 DNM1LO00429 736 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 VWA5AO00534 786 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 SEPT4O43236 478 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 SLC25A27O95847 323 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 IGHA2P01877 340 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 STAT3P40763 770 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 RTP1P59025 263 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 AMHR2Q16671 573 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 SBK1Q52WX2 424 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 FAM47AQ5JRC9 791 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 ARRDC4Q8NCT1 418 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 FERMT2Q96AC1 680 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 SEC62Q99442 399 aaKnown RBP10.73□□□□□ -0.69
HLA-B-253ENST00000481849 LRFN3Q9BTN0 628 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 PRDM5Q9NQX1 630 aaPredicted RBP10.73□□□□□ -0.69
HLA-B-253ENST00000481849 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
HLA-B-253ENST00000481849 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 MAST4O15021 2626 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 DOCK3Q8IZD9 2030 aa10.73□□□□□ -0.69
HLA-B-253ENST00000481849 F5H6K3 240 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 WFS1O76024 890 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 NDUFB10O96000 172 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 TAL1P17542 331 aaPredicted RBP10.72□□□□□ -0.69
HLA-B-253ENST00000481849 ADCYAP1R1P41586 468 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 KLRC3Q07444 240 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 SNRNP48Q6IEG0 339 aaKnown RBP10.72□□□□□ -0.69
HLA-B-253ENST00000481849 RIOX2Q8IUF8 465 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 ZNF444Q8N0Y2 327 aaPredicted RBP10.72□□□□□ -0.69
HLA-B-253ENST00000481849 ABRAQ8N0Z2 381 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 CPXCR1Q8N123 301 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 LRRC47Q8N1G4 583 aaKnown RBP10.72□□□□□ -0.69
HLA-B-253ENST00000481849 PRR7Q8TB68 274 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 LENG1Q96BZ8 264 aaPredicted RBP10.72□□□□□ -0.69
HLA-B-253ENST00000481849 LBHD1Q9BQE6 289 aaPredicted RBP10.72□□□□□ -0.69
HLA-B-253ENST00000481849 SLF1Q9BQI6 1058 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 FSD1Q9BTV5 496 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 PRKAG2Q9UGJ0 569 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 ADAMTS5Q9UNA0 930 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 CTDP1Q9Y5B0 961 aaPredicted RBP10.72□□□□□ -0.69
HLA-B-253ENST00000481849 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
HLA-B-253ENST00000481849 ZFYP08048 801 aaPredicted RBP10.71□□□□□ -0.69
HLA-B-253ENST00000481849 GNAT2P19087 354 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 LRRC41Q15345 812 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 PTPRNQ16849 979 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 GIMAP6Q6P9H5 292 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 SLC39A5Q6ZMH5 540 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 IFNL3Q8IZI9 196 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 REPS2Q8NFH8 660 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 KIFC2Q96AC6 838 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 CEP95Q96GE4 821 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 TINF2Q9BSI4 451 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 NYAP2Q9P242 653 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 ZNF214Q9UL59 606 aaPredicted RBP10.71□□□□□ -0.69
HLA-B-253ENST00000481849 RIPK3Q9Y572 518 aa10.71□□□□□ -0.69
HLA-B-253ENST00000481849 ROBO3Q96MS0 1386 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 TTC41PQ6P2S7 1318 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 PATL2C9JE40 543 aaKnown RBP10.7□□□□□ -0.7
HLA-B-253ENST00000481849 ERC2O15083 957 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 ZBED4O75132 1171 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 PGK1P00558 417 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 RARBP10826 455 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 LRRFIP1Q32MZ4 808 aaKnown RBP10.7□□□□□ -0.7
HLA-B-253ENST00000481849 ZNF792Q3KQV3 632 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 TRIM60Q495X7 471 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 CCDC129Q6ZRS4 1044 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 PI4K2BQ8TCG2 481 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 DDX11Q96FC9 970 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 TEX13BQ9BXU2 312 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 NACAP1Q9BZK3 213 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 NAPBQ9H115 298 aa10.7□□□□□ -0.7
HLA-B-253ENST00000481849 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
HLA-B-253ENST00000481849 XPNPEP3Q9NQH7 507 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms