RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 SAMD3Q8N6K7 520 aa26.48■■□□□ 1.83
SHISA4-203ENST00000481699 RGS22Q8NE09 1264 aa26.48■■□□□ 1.83
SHISA4-203ENST00000481699 FBXO18Q8NFZ0 1043 aa26.48■■□□□ 1.83
SHISA4-203ENST00000481699 PHF20Q9BVI0 1012 aa26.48■■□□□ 1.83
SHISA4-203ENST00000481699 MAF1Q9H063 256 aa26.48■■□□□ 1.83
SHISA4-203ENST00000481699 PCDHA4Q9UN74 947 aa26.48■■□□□ 1.83
SHISA4-203ENST00000481699 TNPO2O14787 897 aaKnown RBP26.47■■□□□ 1.83
SHISA4-203ENST00000481699 STRNO43815 780 aa26.47■■□□□ 1.83
SHISA4-203ENST00000481699 PDIA4P13667 645 aaKnown RBP26.47■■□□□ 1.83
SHISA4-203ENST00000481699 KRT2P35908 639 aa26.47■■□□□ 1.83
SHISA4-203ENST00000481699 MAP3K20Q9NYL2 800 aaKnown RBP26.47■■□□□ 1.83
SHISA4-203ENST00000481699 MMP1P03956 469 aa26.46■■□□□ 1.83
SHISA4-203ENST00000481699 SYT1P21579 422 aa26.46■■□□□ 1.83
SHISA4-203ENST00000481699 LACTBP83111 547 aaPredicted RBP26.46■■□□□ 1.83
SHISA4-203ENST00000481699 ARHGEF6Q15052 776 aa26.46■■□□□ 1.83
SHISA4-203ENST00000481699 MCTP1Q6DN14 999 aa26.46■■□□□ 1.83
SHISA4-203ENST00000481699 GPR142Q7Z601 462 aa26.46■■□□□ 1.83
SHISA4-203ENST00000481699 BLIDQ8IZY5 108 aa26.46■■□□□ 1.83
SHISA4-203ENST00000481699 REXO1Q8N1G1 1221 aaKnown RBP26.46■■□□□ 1.83
SHISA4-203ENST00000481699 CCDC85CA6NKD9 419 aa26.45■■□□□ 1.82
SHISA4-203ENST00000481699 FKTNO75072 461 aa26.45■■□□□ 1.82
SHISA4-203ENST00000481699 PSMC4P43686 418 aa26.45■■□□□ 1.82
SHISA4-203ENST00000481699 BAATQ14032 418 aaPredicted RBP26.45■■□□□ 1.82
SHISA4-203ENST00000481699 MCTP2Q6DN12 878 aa26.45■■□□□ 1.82
SHISA4-203ENST00000481699 A1CFQ9NQ94 594 aaKnown RBP26.45■■□□□ 1.82
SHISA4-203ENST00000481699 TSKSQ9UJT2 592 aa26.45■■□□□ 1.82
SHISA4-203ENST00000481699 SPDYE3A6NKU9 549 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 OPLAHO14841 1288 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 STX6O43752 255 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 HOXA13P31271 388 aaPredicted RBP26.44■■□□□ 1.82
SHISA4-203ENST00000481699 RPS6P62753 249 aaKnown RBP26.44■■□□□ 1.82
SHISA4-203ENST00000481699 UBE2SQ16763 222 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 NOM1Q5C9Z4 860 aaKnown RBP26.44■■□□□ 1.82
SHISA4-203ENST00000481699 USP17L6PQ6QN14 398 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 DIS3L2Q8IYB7 885 aaKnown RBP26.44■■□□□ 1.82
SHISA4-203ENST00000481699 ABRAQ8N0Z2 381 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 DAGLBQ8NCG7 672 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 SHISA4Q96DD7 197 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 ERO1AQ96HE7 468 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 EHMT1Q9H9B1 1298 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 CYP39A1Q9NYL5 469 aa26.44■■□□□ 1.82
SHISA4-203ENST00000481699 SLC15A5A6NIM6 579 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 POTEB2H3BUK9 544 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 PIK3CDO00329 1044 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 PTPREP23469 700 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 HSD17B4P51659 736 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 SLC30A10Q6XR72 485 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.43■■□□□ 1.82
SHISA4-203ENST00000481699 FCHSD1Q86WN1 690 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 TBC1D5Q92609 795 aa26.43■■□□□ 1.82
SHISA4-203ENST00000481699 BIN2Q9UBW5 565 aaPredicted RBP26.43■■□□□ 1.82
SHISA4-203ENST00000481699 FOSP01100 380 aaPredicted RBP26.42■■□□□ 1.82
SHISA4-203ENST00000481699 JAKMIP3Q5VZ66 844 aa26.42■■□□□ 1.82
SHISA4-203ENST00000481699 SLC5A4Q9NY91 659 aa26.42■■□□□ 1.82
SHISA4-203ENST00000481699 MEIS2O14770 477 aa26.41■■□□□ 1.82
SHISA4-203ENST00000481699 ADORA2AP29274 412 aa26.41■■□□□ 1.82
SHISA4-203ENST00000481699 AP3B2Q13367 1082 aa26.41■■□□□ 1.82
SHISA4-203ENST00000481699 DPP9Q86TI2 863 aa26.41■■□□□ 1.82
SHISA4-203ENST00000481699 CD99L2Q8TCZ2 262 aa26.41■■□□□ 1.82
SHISA4-203ENST00000481699 SYTL5Q8TDW5 730 aaPredicted RBP26.41■■□□□ 1.82
SHISA4-203ENST00000481699 ZNF296Q8WUU4 475 aaPredicted RBP26.41■■□□□ 1.82
SHISA4-203ENST00000481699 SOCS4Q8WXH5 440 aa26.41■■□□□ 1.82
SHISA4-203ENST00000481699 CCDC194A0A1B0GVG4 234 aa26.4■■□□□ 1.82
SHISA4-203ENST00000481699 HOXD10P28358 340 aa26.4■■□□□ 1.82
SHISA4-203ENST00000481699 GHRHRQ02643 423 aa26.4■■□□□ 1.82
SHISA4-203ENST00000481699 GRB14Q14449 540 aa26.4■■□□□ 1.82
SHISA4-203ENST00000481699 KRT25Q7Z3Z0 450 aa26.4■■□□□ 1.82
SHISA4-203ENST00000481699 NUDT12Q9BQG2 462 aa26.4■■□□□ 1.82
SHISA4-203ENST00000481699 FOXP1Q9H334 677 aaPredicted RBP26.4■■□□□ 1.82
SHISA4-203ENST00000481699 TMEM260Q9NX78 707 aa26.4■■□□□ 1.82
SHISA4-203ENST00000481699 ADD3Q9UEY8 706 aaKnown RBP26.4■■□□□ 1.82
SHISA4-203ENST00000481699 BTBD18B2RXH4 712 aa26.39■■□□□ 1.82
SHISA4-203ENST00000481699 PGK2P07205 417 aa26.39■■□□□ 1.82
SHISA4-203ENST00000481699 RASGRP4Q8TDF6 673 aa26.39■■□□□ 1.82
SHISA4-203ENST00000481699 OXER1Q8TDS5 423 aa26.39■■□□□ 1.82
SHISA4-203ENST00000481699 TRIM47Q96LD4 638 aa26.39■■□□□ 1.82
SHISA4-203ENST00000481699 MPHOSPH6Q99547 160 aaKnown RBP26.39■■□□□ 1.82
SHISA4-203ENST00000481699 PCDHA6Q9UN73 950 aa26.39■■□□□ 1.82
SHISA4-203ENST00000481699 PCDHA8Q9Y5H6 950 aa26.39■■□□□ 1.82
SHISA4-203ENST00000481699 B4DLN1 442 aa26.38■■□□□ 1.81
SHISA4-203ENST00000481699 MLLT1Q03111 559 aaPredicted RBP26.38■■□□□ 1.81
SHISA4-203ENST00000481699 NPY5RQ15761 445 aa26.38■■□□□ 1.81
SHISA4-203ENST00000481699 ARHGEF16Q5VV41 709 aa26.38■■□□□ 1.81
SHISA4-203ENST00000481699 RMDN3Q96TC7 470 aa26.38■■□□□ 1.81
SHISA4-203ENST00000481699 ARHGAP39Q9C0H5 1083 aa26.38■■□□□ 1.81
SHISA4-203ENST00000481699 RGS2P41220 211 aa26.37■■□□□ 1.81
SHISA4-203ENST00000481699 CLK2P49760 499 aaKnown RBP26.37■■□□□ 1.81
SHISA4-203ENST00000481699 MAP2K5Q13163 448 aa26.37■■□□□ 1.81
SHISA4-203ENST00000481699 NR5A1Q13285 461 aa26.37■■□□□ 1.81
SHISA4-203ENST00000481699 NONOQ15233 471 aaKnown RBP eCLIP26.37■■□□□ 1.81
SHISA4-203ENST00000481699 NSUN6Q8TEA1 469 aaKnown RBP26.37■■□□□ 1.81
SHISA4-203ENST00000481699 ANO3Q9BYT9 981 aa26.37■■□□□ 1.81
SHISA4-203ENST00000481699 MTMR6Q9Y217 621 aa26.37■■□□□ 1.81
SHISA4-203ENST00000481699 RBBP6Q7Z6E9 1792 aaKnown RBP26.37■■□□□ 1.81
SHISA4-203ENST00000481699 GNRH1P01148 92 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 NUCB2P80303 420 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 CNTN2Q02246 1040 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 MORN1Q5T089 497 aa26.36■■□□□ 1.81
SHISA4-203ENST00000481699 FOXD4L5Q5VV16 416 aaPredicted RBP26.36■■□□□ 1.81
SHISA4-203ENST00000481699 PIK3AP1Q6ZUJ8 805 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms