RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
SSBP1-210ENST00000481508 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 IL17RAQ96F46 866 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 PIGSQ96S52 555 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 RIOX1Q9H6W3 641 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 A1CFQ9NQ94 594 aaKnown RBP12.31□□□□□ -0.44
SSBP1-210ENST00000481508 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 OPLAHO14841 1288 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 STRNO43815 780 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 HMGCRP04035 888 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 CCL5P13501 91 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 PSMA5P28066 241 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 CDC27P30260 824 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 CYP2C19P33261 490 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 CACNB2Q08289 660 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-210ENST00000481508 KCTD2Q14681 263 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 TKFCQ3LXA3 575 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 TMTC2Q8N394 836 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-210ENST00000481508 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 MAML3Q96JK9 1138 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 MAP3K14Q99558 947 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 TM6SF1Q9BZW5 370 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 SCUBE2Q9NQ36 999 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 PRDM6Q9NQX0 595 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 MTMR10Q9NXD2 777 aa12.3□□□□□ -0.44
SSBP1-210ENST00000481508 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-210ENST00000481508 A0A1W2PPC1 479 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 PYGBP11216 843 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 CCND3P30281 292 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-210ENST00000481508 FUT2Q10981 343 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 PRAMEF19Q5SWL8 479 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 MAP3K21Q5TCX8 1036 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 TMTC3Q6ZXV5 915 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 FANCBQ8NB91 859 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 CNTNAP5Q8WYK1 1306 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 NID2Q14112 1375 aa12.29□□□□□ -0.44
SSBP1-210ENST00000481508 GOLGA8AA7E2F4 631 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 GOLGA8BA8MQT2 603 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 ZBTB5O15062 677 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 ZBTB43O43298 467 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 BAATQ14032 418 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-210ENST00000481508 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 NSMFQ6X4W1 530 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 FBXO11Q86XK2 927 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 ANKRD35Q8N283 1001 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 CCDC82Q8N4S0 544 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 FAM133AQ8N9E0 248 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 KIF2CQ99661 725 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 SPZ1Q9BXG8 430 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 PDRG1Q9NUG6 133 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 FBXO40Q9UH90 709 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 NAP1L2Q9ULW6 460 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-210ENST00000481508 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 NCOR1O75376 2440 aa12.28□□□□□ -0.44
SSBP1-210ENST00000481508 DTNBO60941 627 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 FARP2O94887 1054 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-210ENST00000481508 CALM1P0DP23 149 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 CALM2P0DP24 149 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 CALM3P0DP25 149 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-210ENST00000481508 KIF5BP33176 963 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 EVCP57679 992 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 ANAPC15P60006 121 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 UBXN2AP68543 259 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 RTN1Q16799 776 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.27□□□□□ -0.45
SSBP1-210ENST00000481508 RNF208Q9H0X6 261 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 PAK6Q9NQU5 681 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-210ENST00000481508 COL20A1Q9P218 1284 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 NR2E3Q9Y5X4 410 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 ABCB11O95342 1321 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 KIAA1217Q5T5P2 1943 aa12.27□□□□□ -0.45
SSBP1-210ENST00000481508 PPFIA3O75145 1194 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 LARGE1O95461 756 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 SNAI1O95863 264 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-210ENST00000481508 CYBAP13498 195 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 COL9A1P20849 921 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 CALML3P27482 149 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 PDIA3P30101 505 aaKnown RBP12.26□□□□□ -0.45
SSBP1-210ENST00000481508 ADD1P35611 737 aaKnown RBP12.26□□□□□ -0.45
SSBP1-210ENST00000481508 AK2P54819 239 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 RPS6P62753 249 aaKnown RBP12.26□□□□□ -0.45
SSBP1-210ENST00000481508 FGD1P98174 961 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 TRMT44Q8IYL2 757 aaKnown RBP12.26□□□□□ -0.45
SSBP1-210ENST00000481508 AMNQ9BXJ7 453 aa12.26□□□□□ -0.45
SSBP1-210ENST00000481508 NCOA5Q9HCD5 579 aaKnown RBP12.26□□□□□ -0.45
SSBP1-210ENST00000481508 DIS3Q9Y2L1 958 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms