RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 DUSP28Q4G0W2 176 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 ZNF697Q5TEC3 545 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 NOL8Q76FK4 1167 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 FBXO16Q8IX29 292 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 FAM126BQ8IXS8 530 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 ENAHQ8N8S7 591 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 SLC43A3Q8NBI5 491 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 UBAC1Q9BSL1 405 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
SQSTM1-207ENST00000481335 ABCB11O95342 1321 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 GSPT1P15170 499 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 EDNRBP24530 442 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 ITGB8P26012 769 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 RPS6P62753 249 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 PPIGQ13427 754 aaKnown RBP eCLIP14.19□□□□□ -0.149e-12■■□□□ 13.5
SQSTM1-207ENST00000481335 C9orf50Q5SZB4 431 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 MFSD5Q6N075 450 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 VTI1AQ96AJ9 217 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 ZSWIM5Q9P217 1185 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 CDH23Q9H251 3354 aa14.19□□□□□ -0.14
SQSTM1-207ENST00000481335 CD4P01730 458 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 PARP1P09874 1014 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 CPT1AP50416 773 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 TRDNQ13061 729 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 CDC37Q16543 378 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 BRDTQ58F21 947 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 IFIT1BQ5T764 474 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 SLC30A10Q6XR72 485 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 KIAA1211Q6ZU35 1233 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 Q7L0L9 218 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 MCF2L2Q86YR7 1114 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 TMEM199Q8N511 208 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 SCFD2Q8WU76 684 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 RNPC3Q96LT9 517 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 POLR3EQ9NVU0 708 aa14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-207ENST00000481335 DYNC1LI2O43237 492 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 CALML3P27482 149 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 PDE4AP27815 886 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 BEX3Q00994 111 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 PDE4DQ08499 809 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 TRAF1Q13077 416 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 ITGA7Q13683 1181 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 PPP2R5BQ15173 497 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 PSRC1Q6PGN9 363 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 CXCL17Q6UXB2 119 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 EEPD1Q7L9B9 569 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 SAMD3Q8N6K7 520 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 WDR11Q9BZH6 1224 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 PDGFCQ9NRA1 345 aa14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 MAP3K20Q9NYL2 800 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-207ENST00000481335 KPNA6O60684 536 aa14.16□□□□□ -0.14
SQSTM1-207ENST00000481335 GOLGA8HP0CJ92 632 aa14.16□□□□□ -0.14
SQSTM1-207ENST00000481335 IRX5P78411 483 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-207ENST00000481335 USH1GQ495M9 461 aa14.16□□□□□ -0.14
SQSTM1-207ENST00000481335 ADGRF4Q8IZF3 695 aa14.16□□□□□ -0.14
SQSTM1-207ENST00000481335 MRPL11Q9Y3B7 192 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-207ENST00000481335 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 CHMLP26374 656 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 GHRHRQ02643 423 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 TTLL4Q14679 1199 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 SEC23AQ15436 765 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 FBXO11Q86XK2 927 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 SLC17A8Q8NDX2 589 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 NSUN6Q8TEA1 469 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 PURBQ96QR8 312 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 IWS1Q96ST2 819 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 IL25Q9H293 177 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 A0A0C4DFX4 3053 aa14.15□□□□□ -0.14
SQSTM1-207ENST00000481335 ERICH2A1L162 156 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 SUPT20HL2P0C7V6 817 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 EPHB4P54760 987 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 PURAQ00577 322 aaKnown RBP14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 QRICH1Q2TAL8 776 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 OR6J1Q8NGC5 347 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 MTMR8Q96EF0 704 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 GUCD1Q96NT3 240 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 AMNQ9BXJ7 453 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 MTIF3Q9H2K0 278 aaKnown RBP14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 HIPK3Q9H422 1215 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 UNC80Q8N2C7 3258 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 TANC1Q9C0D5 1861 aa14.14□□□□□ -0.15
SQSTM1-207ENST00000481335 A6NJR5 290 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 SGSM2O43147 1006 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 CYP21A2P08686 494 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 PTPN11Q06124 597 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 RALYLQ86SE5 291 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 NCOA7Q8NI08 942 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 SYTL5Q8TDW5 730 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■■□□ 18.9
SQSTM1-207ENST00000481335 MTG1Q9BT17 334 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 MTA3Q9BTC8 594 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 JMJD4Q9H9V9 463 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms