RNA–Protein interactions for RNA: ENST00000481237.1

UBL4A-206, Transcript of ubiquitin like 4A, human

TSL 4

Gene UBL4A, Length 340 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBL4A-206	ENST00000481237	CCSAP	Q6IQ19	270 aa	Predicted RBP	29.09	■■■□□ 2.25
UBL4A-206	ENST00000481237	CATIP	Q7Z7H3	387 aa		29.09	■■■□□ 2.25
UBL4A-206	ENST00000481237	FBXO16	Q8IX29	292 aa	Predicted RBP	29.09	■■■□□ 2.25
UBL4A-206	ENST00000481237	PCSK9	Q8NBP7	692 aa	Known RBP	29.09	■■■□□ 2.25
UBL4A-206	ENST00000481237	DNER	Q8NFT8	737 aa		29.09	■■■□□ 2.25
UBL4A-206	ENST00000481237	MRPL11	Q9Y3B7	192 aa	Known RBP	29.09	■■■□□ 2.25
UBL4A-206	ENST00000481237	MCM5	P33992	734 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	TROAP	Q12815	778 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	TRIM60	Q495X7	471 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	TAPT1	Q6NXT6	567 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	MCF2L2	Q86YR7	1114 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	NUP133	Q8WUM0	1156 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	MTMR8	Q96EF0	704 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	PRKAG2	Q9UGJ0	569 aa		29.08	■■■□□ 2.25
UBL4A-206	ENST00000481237	MYADML2	A6NDP7	307 aa		29.07	■■■□□ 2.24
UBL4A-206	ENST00000481237	FXR1	P51114	621 aa	Known RBP eCLIP	29.07	■■■□□ 2.24
UBL4A-206	ENST00000481237	AMN	Q9BXJ7	453 aa		29.07	■■■□□ 2.24
UBL4A-206	ENST00000481237	PDGFC	Q9NRA1	345 aa		29.07	■■■□□ 2.24
UBL4A-206	ENST00000481237	GNE	Q9Y223	722 aa	Known RBP	29.07	■■■□□ 2.24
UBL4A-206	ENST00000481237		B4DLN1	442 aa		29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	PRC1	O43663	620 aa		29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	MRPL12	P52815	198 aa	Known RBP	29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	NKX3-2	P78367	333 aa		29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	GNAS	Q5JWF2	1037 aa		29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	RNF20	Q5VTR2	975 aa		29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	LY9	Q9HBG7	655 aa		29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	STARD7	Q9NQZ5	370 aa		29.06	■■■□□ 2.24
UBL4A-206	ENST00000481237	ZBTB5	O15062	677 aa		29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237	SMPD1	P17405	629 aa		29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237	IRX5	P78411	483 aa	Predicted RBP	29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237	TLK2	Q86UE8	772 aa		29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237	TMTC2	Q8N394	836 aa		29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237	TMEM87B	Q96K49	555 aa		29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237	RIOX1	Q9H6W3	641 aa		29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237		Q9Y3F1	56 aa		29.05	■■■□□ 2.24
UBL4A-206	ENST00000481237	ASGR1	P07306	291 aa		29.04	■■■□□ 2.24
UBL4A-206	ENST00000481237	PDE4D	Q08499	809 aa		29.04	■■■□□ 2.24
UBL4A-206	ENST00000481237	TBC1D5	Q92609	795 aa		29.04	■■■□□ 2.24
UBL4A-206	ENST00000481237	GLT1D1	Q96MS3	346 aa		29.04	■■■□□ 2.24
UBL4A-206	ENST00000481237	MAP3K14	Q99558	947 aa		29.04	■■■□□ 2.24
UBL4A-206	ENST00000481237	AP5M1	Q9H0R1	490 aa		29.04	■■■□□ 2.24
UBL4A-206	ENST00000481237	CTAGE5	O15320	804 aa		29.03	■■■□□ 2.24
UBL4A-206	ENST00000481237	EDNRB	P24530	442 aa		29.03	■■■□□ 2.24
UBL4A-206	ENST00000481237	ZNF654	Q8IZM8	581 aa		29.03	■■■□□ 2.24
UBL4A-206	ENST00000481237	SYTL5	Q8TDW5	730 aa	Predicted RBP	29.03	■■■□□ 2.24
UBL4A-206	ENST00000481237	ELP1	O95163	1332 aa		29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	DYNC1LI2	O43237	492 aa	Predicted RBP	29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	DDAH1	O94760	285 aa		29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	MDM2	Q00987	491 aa	Predicted RBP	29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	TLE2	Q04725	743 aa		29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	TRAF1	Q13077	416 aa		29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	HOMER1	Q86YM7	354 aa		29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	LBHD1	Q9BQE6	289 aa	Predicted RBP	29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	UBE2O	Q9C0C9	1292 aa	Known RBP	29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	GPHN	Q9NQX3	736 aa	Predicted RBP	29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	PCDHA1	Q9Y5I3	950 aa		29.02	■■■□□ 2.24
UBL4A-206	ENST00000481237	RBM47	A0AV96	593 aa	Known RBP	29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	SH2B2	O14492	632 aa	Predicted RBP	29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	BEX3	Q00994	111 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	SLC35G1	Q2M3R5	365 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	DUSP28	Q4G0W2	176 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	NFXL1	Q6ZNB6	911 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	CTCFL	Q8NI51	663 aa	Predicted RBP	29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	VTI1A	Q96AJ9	217 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	PIGS	Q96S52	555 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	WDR11	Q9BZH6	1224 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	PRDM5	Q9NQX1	630 aa	Predicted RBP	29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	PCDH10	Q9P2E7	1040 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	LTBP2	Q14767	1821 aa		29.01	■■■□□ 2.23
UBL4A-206	ENST00000481237	CCDC69	A6NI79	296 aa		29	■■■□□ 2.23
UBL4A-206	ENST00000481237	CYTH3	O43739	400 aa		29	■■■□□ 2.23
UBL4A-206	ENST00000481237	ZEB2	O60315	1214 aa		29	■■■□□ 2.23
UBL4A-206	ENST00000481237	PPP1R11	O60927	126 aa	Predicted RBP	29	■■■□□ 2.23
UBL4A-206	ENST00000481237	LIFR	P42702	1097 aa		29	■■■□□ 2.23
UBL4A-206	ENST00000481237	FSCN1	Q16658	493 aa	Known RBP	29	■■■□□ 2.23
UBL4A-206	ENST00000481237	NSUN6	Q8TEA1	469 aa	Known RBP	29	■■■□□ 2.23
UBL4A-206	ENST00000481237	TAAR1	Q96RJ0	339 aa		29	■■■□□ 2.23
UBL4A-206	ENST00000481237	PDLIM7	Q9NR12	457 aa		29	■■■□□ 2.23
UBL4A-206	ENST00000481237	PQBP1	O60828	265 aa	Known RBP	28.99	■■■□□ 2.23
UBL4A-206	ENST00000481237	CFB	P00751	764 aa		28.99	■■■□□ 2.23
UBL4A-206	ENST00000481237	KIF5B	P33176	963 aa		28.99	■■■□□ 2.23
UBL4A-206	ENST00000481237	TMEM63B	Q5T3F8	832 aa		28.99	■■■□□ 2.23
UBL4A-206	ENST00000481237	SAMD3	Q8N6K7	520 aa		28.99	■■■□□ 2.23
UBL4A-206	ENST00000481237	TOX2	Q96NM4	488 aa		28.99	■■■□□ 2.23
UBL4A-206	ENST00000481237	MYL10	Q9BUA6	226 aa		28.99	■■■□□ 2.23
UBL4A-206	ENST00000481237	PNMA6F	A0A0J9YX94	578 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	CLTB	P09497	229 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	PTGS1	P23219	599 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	COL9A3	Q14050	684 aa	Predicted RBP	28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	ANKRD33	Q7Z3H0	272 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	IWS1	Q96ST2	819 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	RMDN3	Q96TC7	470 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	MAP3K20	Q9NYL2	800 aa	Known RBP	28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	COL20A1	Q9P218	1284 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	KIAA1217	Q5T5P2	1943 aa		28.98	■■■□□ 2.23
UBL4A-206	ENST00000481237	MROH7	Q68CQ1	1323 aa		28.97	■■■□□ 2.23
UBL4A-206	ENST00000481237		A0A0U1RQG5	324 aa	Predicted RBP	28.97	■■■□□ 2.23
UBL4A-206	ENST00000481237	OPLAH	O14841	1288 aa		28.97	■■■□□ 2.23
UBL4A-206	ENST00000481237	CABYR	O75952	493 aa		28.97	■■■□□ 2.23
UBL4A-206	ENST00000481237	HSD17B4	P51659	736 aa		28.97	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms