RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TSHZ3Q63HK5 1081 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 GIMAP6Q6P9H5 292 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 STK11IPQ8N1F8 1099 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 ANKRD35Q8N283 1001 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 NEK9Q8TD19 979 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 AP5M1Q9H0R1 490 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 MCM3APO60318 1980 aa11.25□□□□□ -0.61
SMARCE1-210ENST00000481231 ZFHX2Q9C0A1 2572 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 IGKV6D-41A0A0C4DH26 115 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 IQCF3P0C7M6 154 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 KCNJ6P48051 423 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 WDR5P61964 334 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 DEFB103AP81534 67 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 EP400NLQ6ZTU2 488 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 KBTBD3Q8NAB2 608 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 APPBP2Q92624 585 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 PDGFCQ9NRA1 345 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
SMARCE1-210ENST00000481231 PTPRSQ13332 1948 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 LINC01553A4QN01 128 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 RNF113AO15541 343 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 GPAA1O43292 621 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 ZEB2O60315 1214 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 PRDM1O75626 825 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 SUPT20HL2P0C7V6 817 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 RFC2P35250 354 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 ERVK-21P61565 698 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 FAM47CQ5HY64 1035 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 EEPD1Q7L9B9 569 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 ADHFE1Q8IWW8 467 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 FBXO16Q8IX29 292 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 PRPF38AQ8NAV1 312 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 SEZ6LQ9BYH1 1024 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 MYO15AQ9UKN7 3530 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 MYH8P13535 1937 aa11.23□□□□□ -0.61
SMARCE1-210ENST00000481231 M0R2C6 588 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 ZBED4O75132 1171 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 BAIAP3O94812 1187 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 TDO2P48775 406 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 SLC38A10Q9HBR0 1119 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
SMARCE1-210ENST00000481231 TANC1Q9C0D5 1861 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 ZFYP08048 801 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 TCTN1Q2MV58 587 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 FAM117BQ6P1L5 589 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 FAM133AQ8N9E0 248 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 MKL1Q969V6 931 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 DCTPP1Q9H773 170 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 PRKAG3Q9UGI9 489 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 FEM1BQ9UK73 627 aa11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-210ENST00000481231 DCHS1Q96JQ0 3298 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 TECTAO75443 2155 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 MYH7P12883 1935 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 GJB5O95377 273 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 TTLL1O95922 423 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 APPP05067 770 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 MYL3P08590 195 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 GNAT2P19087 354 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 PURAQ00577 322 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 CLUL1Q15846 466 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 TCEAL5Q5H9L2 206 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 TAPT1Q6NXT6 567 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 RNF135Q8IUD6 432 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 GMCL1P1Q8NEA9 526 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 FBXO22Q8NEZ5 403 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 PBXIP1Q96AQ6 731 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 CRBNQ96SW2 442 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 RAD9AQ99638 391 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 ZNF287Q9HBT7 754 aa11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 ALG13Q9NP73 1137 aaKnown RBP11.2□□□□□ -0.62
SMARCE1-210ENST00000481231 FBXO40Q9UH90 709 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms