RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CCAR1Q8IX12 1150 aaKnown RBP11.92□□□□□ -0.5
LINC00173-203ENST00000480237 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 FSIP1Q8NA03 581 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 MRPS27Q92552 414 aaKnown RBP11.92□□□□□ -0.5
LINC00173-203ENST00000480237 CUL5Q93034 780 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 CDCA5Q96FF9 252 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 KIAA1683Q9H0B3 1180 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 FEM1BQ9UK73 627 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 PCDHA6Q9UN73 950 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 PCDHA8Q9Y5H6 950 aa11.92□□□□□ -0.5
LINC00173-203ENST00000480237 M0R2N6 131 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 MAP3K7O43318 606 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 BMP15O95972 392 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 PTPRAP18433 802 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 SNAP25P60880 206 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00173-203ENST00000480237 USH1GQ495M9 461 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 ADALQ6DHV7 355 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
LINC00173-203ENST00000480237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00173-203ENST00000480237 KIFC2Q96AC6 838 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 WDR18Q9BV38 432 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 TANGO6Q9C0B7 1094 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 PCDHA1Q9Y5I3 950 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 CSADQ9Y600 493 aa11.91□□□□□ -0.5
LINC00173-203ENST00000480237 A0A1W2PQ27 194 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 A0A1W2PQ64 194 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 A0A1W2PQD8 194 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 TULP1O00294 542 aaPredicted RBP11.9□□□□□ -0.5
LINC00173-203ENST00000480237 PLA2G6O60733 806 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 IREB2P48200 963 aaKnown RBP11.9□□□□□ -0.5
LINC00173-203ENST00000480237 TRAF1Q13077 416 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 SPP2Q13103 211 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
LINC00173-203ENST00000480237 INF2Q27J81 1249 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 JAKMIP3Q5VZ66 844 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 DLK2Q6UY11 383 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
LINC00173-203ENST00000480237 ZNF280CQ8ND82 737 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 GLT8D2Q9H1C3 349 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
LINC00173-203ENST00000480237 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
LINC00173-203ENST00000480237 DDX19AQ9NUU7 478 aaKnown RBP11.9□□□□□ -0.5
LINC00173-203ENST00000480237 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
LINC00173-203ENST00000480237 DOCK3Q8IZD9 2030 aa11.9□□□□□ -0.51
LINC00173-203ENST00000480237 SYCE3A1L190 88 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 CUTAO60888 179 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 USP2O75604 605 aaPredicted RBP11.89□□□□□ -0.51
LINC00173-203ENST00000480237 VCAM1P19320 739 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 MRPL12P52815 198 aaKnown RBP11.89□□□□□ -0.51
LINC00173-203ENST00000480237 BACE1P56817 501 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 ZNF174Q15697 407 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 UBE2SQ16763 222 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 SLF1Q9BQI6 1058 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 NUP62CLQ9H1M0 184 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 TMEM260Q9NX78 707 aa11.89□□□□□ -0.51
LINC00173-203ENST00000480237 WNT7AO00755 349 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 KINO60870 393 aaKnown RBP11.88□□□□□ -0.51
LINC00173-203ENST00000480237 NR1I2O75469 434 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 MCM7P33993 719 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 FAM160A1Q05DH4 1040 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 DGKZQ13574 1117 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 VGLL4Q14135 290 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
LINC00173-203ENST00000480237 GOLPH3LQ9H4A5 285 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 RPAP3Q9H6T3 665 aaPredicted RBP11.88□□□□□ -0.51
LINC00173-203ENST00000480237 PSTPIP2Q9H939 334 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 FBXO28Q9NVF7 368 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 DACT1Q9NYF0 836 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 ZHX2Q9Y6X8 837 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 A0A1B0GVL5 298 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 POTECB2RU33 542 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 FLOT1O75955 427 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 HMGCS2P54868 508 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 ZNF445P59923 1031 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 AXDND1Q5T1B0 1012 aaPredicted RBP11.88□□□□□ -0.51
LINC00173-203ENST00000480237 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.88□□□□□ -0.51
LINC00173-203ENST00000480237 NEK8Q86SG6 692 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 TMOD4Q9NZQ9 345 aa11.88□□□□□ -0.51
LINC00173-203ENST00000480237 FBXO2Q9UK22 296 aaPredicted RBP11.88□□□□□ -0.51
LINC00173-203ENST00000480237 CTDP1Q9Y5B0 961 aaPredicted RBP11.88□□□□□ -0.51
LINC00173-203ENST00000480237 C19orf81C9J6K1 198 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 LETM1O95202 739 aaPredicted RBP11.87□□□□□ -0.51
LINC00173-203ENST00000480237 TAL1P17542 331 aaPredicted RBP11.87□□□□□ -0.51
LINC00173-203ENST00000480237 CMA1P23946 247 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
LINC00173-203ENST00000480237 PTGDRQ13258 359 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 TSR1Q2NL82 804 aaKnown RBP11.87□□□□□ -0.51
LINC00173-203ENST00000480237 LETM2Q2VYF4 491 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
LINC00173-203ENST00000480237 TBCKQ8TEA7 893 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 FERMT2Q96AC1 680 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 C12orf42Q96LP6 360 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 TNMDQ9H2S6 317 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 CLSTN2Q9H4D0 955 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms