RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 RELTQ969Z4 430 aa6.98□□□□□ -1.29
ITGB1-212ENST00000480226 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
ITGB1-212ENST00000480226 STRIP2Q9ULQ0 834 aa6.98□□□□□ -1.29
ITGB1-212ENST00000480226 BACE2Q9Y5Z0 518 aa6.98□□□□□ -1.29
ITGB1-212ENST00000480226 NCANO14594 1321 aa6.98□□□□□ -1.29
ITGB1-212ENST00000480226 ANKRD34BA5PLL1 514 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 C2orf71A6NGG8 1288 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 VMACQ2NL98 169 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 KIAA1211LQ6NV74 962 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 VHLLQ6RSH7 139 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 CABP7Q86V35 215 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 SP8Q8IXZ3 490 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 MCMBPQ9BTE3 642 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 INPP5FQ9Y2H2 1132 aa6.97□□□□□ -1.29
ITGB1-212ENST00000480226 TRBV23OR9-2A0A075B6M9 112 aa6.96□□□□□ -1.3
ITGB1-212ENST00000480226 ZC3H12DA2A288 527 aaKnown RBP6.96□□□□□ -1.3
ITGB1-212ENST00000480226 NAT2P11245 290 aa6.96□□□□□ -1.3
ITGB1-212ENST00000480226 IGFBP6P24592 240 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-212ENST00000480226 ERCC5P28715 1186 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-212ENST00000480226 PRR5P85299 388 aa6.96□□□□□ -1.3
ITGB1-212ENST00000480226 CAP1Q01518 475 aa6.96□□□□□ -1.3
ITGB1-212ENST00000480226 LZTR1Q8N653 840 aa6.96□□□□□ -1.3
ITGB1-212ENST00000480226 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
ITGB1-212ENST00000480226 A0A0G2JLL6 359 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-212ENST00000480226 PAMP19021 973 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-212ENST00000480226 APBA2Q99767 749 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 RNF38Q9H0F5 515 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 CCSER2Q9H7U1 834 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 SUSD2Q9UGT4 822 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 AKT3Q9Y243 479 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 FAN1Q9Y2M0 1017 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 HCFC2Q9Y5Z7 792 aa6.95□□□□□ -1.3
ITGB1-212ENST00000480226 NPHP3-ACAD11A0A0J9YXS1 232 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 GLI4P10075 376 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 NCAM1P13591 858 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 LIMS1P48059 325 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 ZNF143P52747 638 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-212ENST00000480226 FOXO4P98177 505 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 NFIXQ14938 502 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 POMZP3Q6PJE2 187 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 ANAPC16Q96DE5 110 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
ITGB1-212ENST00000480226 NUDT5Q9UKK9 219 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
ITGB1-212ENST00000480226 OTOL1A6NHN0 477 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-212ENST00000480226 E9PSI1 815 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 NPHS1O60500 1241 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 FBLN1P23142 703 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 NCAPHQ15003 741 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 CPNE8Q86YQ8 564 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 NETO2Q8NC67 525 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 USP33Q8TEY7 942 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 ALG3Q92685 438 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 PEX11GQ96HA9 241 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 TINF2Q9BSI4 451 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 RTEL1Q9NZ71 1219 aa6.93□□□□□ -1.3
ITGB1-212ENST00000480226 NOP56O00567 594 aaKnown RBP6.92□□□□□ -1.3
ITGB1-212ENST00000480226 FOXD2O60548 495 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-212ENST00000480226 KCNH1O95259 989 aa6.92□□□□□ -1.3
ITGB1-212ENST00000480226 SYN1P17600 705 aa6.92□□□□□ -1.3
ITGB1-212ENST00000480226 FAM169BQ8N8A8 192 aa6.92□□□□□ -1.3
ITGB1-212ENST00000480226 ZNF513Q8N8E2 541 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-212ENST00000480226 BVESQ8NE79 360 aa6.92□□□□□ -1.3
ITGB1-212ENST00000480226 FEZF2Q8TBJ5 459 aa6.92□□□□□ -1.3
ITGB1-212ENST00000480226 TSPAN17Q96FV3 270 aa6.92□□□□□ -1.3
ITGB1-212ENST00000480226 EMC9Q9Y3B6 208 aa6.92□□□□□ -1.3
ITGB1-212ENST00000480226 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 ASGR2P07307 311 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 ATF2P15336 505 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-212ENST00000480226 SLC9A5Q14940 896 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 ERICH6BQ5W0A0 696 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 VPS37DQ86XT2 251 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 ZDHHC14Q8IZN3 488 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 TP53I13Q8NBR0 393 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-212ENST00000480226 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.91□□□□□ -1.35e-6■□□□□ 9.7
ITGB1-212ENST00000480226 GULP1Q9UBP9 304 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 APEX2Q9UBZ4 518 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 PMF1-BGLAPU3KQ54 211 aa6.91□□□□□ -1.3
ITGB1-212ENST00000480226 C7orf72A4D263 438 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 FFAR3O14843 346 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 PPP1R11O60927 126 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-212ENST00000480226 BUD31P41223 144 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-212ENST00000480226 KCNC1P48547 511 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 CXorf38Q8TB03 319 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 MMP19Q99542 508 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 RXFP1Q9HBX9 757 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 CAPN10Q9HC96 672 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.3
ITGB1-212ENST00000480226 SCRN1Q12765 414 aa6.89□□□□□ -1.31
ITGB1-212ENST00000480226 B3GNT8Q7Z7M8 397 aa6.89□□□□□ -1.31
ITGB1-212ENST00000480226 SYT8Q8NBV8 401 aa6.89□□□□□ -1.31
ITGB1-212ENST00000480226 COPS5Q92905 334 aa6.89□□□□□ -1.31
ITGB1-212ENST00000480226 PPP1R14AQ96A00 147 aa6.89□□□□□ -1.31
ITGB1-212ENST00000480226 CLEC1BQ9P126 229 aa6.89□□□□□ -1.31
ITGB1-212ENST00000480226 FUCA1P04066 466 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms