RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TLL1O43897 1013 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 ZEB2O60315 1214 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 ARHGEF15O94989 841 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 CA3P07451 260 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 FDX1P10109 184 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 CYP2C9P11712 490 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 ALAS1P13196 640 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 MCCP23508 829 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 TMEM67Q5HYA8 995 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 KRT40Q6A162 431 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 IQSEC1Q6DN90 963 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 EEPD1Q7L9B9 569 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 FAM160B2Q86V87 743 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 OTUD7AQ8TE49 926 aaPredicted RBP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 KHSRPQ92945 711 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 SEC62Q99442 399 aaKnown RBP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 LNPKQ9C0E8 428 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 AP5M1Q9H0R1 490 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 CERS4Q9HA82 394 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 EPB41L4AQ9HCS5 686 aaPredicted RBP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 RNF146Q9NTX7 359 aa8.35□□□□□ -1.07
COL17A1-205ENST00000480127 TRMT13Q9NUP7 481 aaKnown RBP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
COL17A1-205ENST00000480127 GTPBP6O43824 516 aaPredicted RBP8.34□□□□□ -1.07
COL17A1-205ENST00000480127 DHX16O60231 1041 aaKnown RBP8.34□□□□□ -1.07
COL17A1-205ENST00000480127 PFKMP08237 780 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 TAP1Q03518 808 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 TKFCQ3LXA3 575 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 MUM1L1Q5H9M0 696 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 ZMYM1Q5SVZ6 1142 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 NSMFQ6X4W1 530 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 KCTD1Q719H9 257 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 FBXO16Q8IX29 292 aaPredicted RBP8.34□□□□□ -1.07
COL17A1-205ENST00000480127 NEDD1Q8NHV4 660 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 MORC4Q8TE76 937 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 STAG1Q8WVM7 1258 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 PURBQ96QR8 312 aaKnown RBP8.34□□□□□ -1.07
COL17A1-205ENST00000480127 MPHOSPH6Q99547 160 aaKnown RBP8.34□□□□□ -1.07
COL17A1-205ENST00000480127 C11orf16Q9NQ32 467 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 CYP39A1Q9NYL5 469 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 CHD7Q9P2D1 2997 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 CCPG1Q9ULG6 757 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 COG5Q9UP83 839 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 NCOR1O75376 2440 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 PLIN4Q96Q06 1357 aa8.34□□□□□ -1.07
COL17A1-205ENST00000480127 MYO9BQ13459 2157 aa8.34□□□□□ -1.08
COL17A1-205ENST00000480127 TNKSO95271 1327 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 PTPDC1A2A3K4 754 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 LPXNO60711 386 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 PLA2G6O60733 806 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 SUPT20HL2P0C7V6 817 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 SNAP25P60880 206 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 HAND2P61296 217 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 PURAQ00577 322 aaKnown RBP8.33□□□□□ -1.08
COL17A1-205ENST00000480127 DUSP28Q4G0W2 176 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 MCMDC2Q4G0Z9 681 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 MFSD6Q6ZSS7 791 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 KIAA1211Q6ZU35 1233 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 SPRED2Q7Z698 418 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 PHOSPHO2Q8TCD6 241 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 PI4K2BQ8TCG2 481 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 GMCL1Q96IK5 515 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 SLC9A7Q96T83 725 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 RNF41Q9H4P4 317 aaPredicted RBP8.33□□□□□ -1.08
COL17A1-205ENST00000480127 VTA1Q9NP79 307 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 HELLSQ9NRZ9 838 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
COL17A1-205ENST00000480127 RBM47A0AV96 593 aaKnown RBP8.32□□□□□ -1.08
COL17A1-205ENST00000480127 GPR37L1O60883 481 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 IQCF3P0C7M6 154 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 PDE1AP54750 535 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 CHMP4BP1P59074 171 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 GRB10Q13322 594 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 AAMPQ13685 434 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 TMEM31Q5JXX7 168 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 RASGRP2Q7LDG7 609 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 HERC6Q8IVU3 1022 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 PPP1R13LQ8WUF5 828 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 ARNTL2Q8WYA1 636 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 HLA-CQ95604 372 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 GPCPD1Q9NPB8 672 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 CD320Q9NPF0 282 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
COL17A1-205ENST00000480127 POLR3EQ9NVU0 708 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 PRR12Q9ULL5 1215 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 HCN4Q9Y3Q4 1203 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 REV3LO60673 3130 aa8.32□□□□□ -1.08
COL17A1-205ENST00000480127 PRRC2BQ5JSZ5 2229 aaKnown RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 FRMPD2Q68DX3 1309 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-205ENST00000480127 LCTP09848 1927 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 B4DLN1 442 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 HIP1O00291 1037 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 ZNF213O14771 459 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 NMT2O60551 498 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 MYL3P08590 195 aa8.31□□□□□ -1.08
COL17A1-205ENST00000480127 TOP1P11387 765 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms