RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CBX2Q14781 532 aaPredicted RBP14.48□□□□□ -0.09
USP11-208ENST00000480104 ANKRD35Q8N283 1001 aa14.48□□□□□ -0.09
USP11-208ENST00000480104 INSL6Q9Y581 213 aa14.48□□□□□ -0.09
USP11-208ENST00000480104 DDX49Q9Y6V7 483 aaKnown RBP14.48□□□□□ -0.09
USP11-208ENST00000480104 ABHD14A-ACY1A0A1B0GW23 586 aa14.47□□□□□ -0.09
USP11-208ENST00000480104 CYP7A1P22680 504 aa14.47□□□□□ -0.09
USP11-208ENST00000480104 PURAQ00577 322 aaKnown RBP14.47□□□□□ -0.09
USP11-208ENST00000480104 LRRFIP1Q32MZ4 808 aaKnown RBP14.47□□□□□ -0.09
USP11-208ENST00000480104 FAM83BQ5T0W9 1011 aa14.47□□□□□ -0.09
USP11-208ENST00000480104 KIAA2013Q8IYS2 634 aa14.47□□□□□ -0.09
USP11-208ENST00000480104 TMEM105Q8N8V8 129 aa14.47□□□□□ -0.09
USP11-208ENST00000480104 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
USP11-208ENST00000480104 PDGFCQ9NRA1 345 aa14.47□□□□□ -0.09
USP11-208ENST00000480104 OTOGLQ3ZCN5 2332 aa14.46□□□□□ -0.09
USP11-208ENST00000480104 LINC01565O15544 149 aa14.46□□□□□ -0.09
USP11-208ENST00000480104 UQCRFS1P1P0C7P4 283 aa14.46□□□□□ -0.09
USP11-208ENST00000480104 GTF2F1P35269 517 aaKnown RBP eCLIP14.46□□□□□ -0.09
USP11-208ENST00000480104 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.46□□□□□ -0.09
USP11-208ENST00000480104 SAMD11Q96NU1 681 aa14.46□□□□□ -0.09
USP11-208ENST00000480104 POLR3EQ9NVU0 708 aa14.46□□□□□ -0.09
USP11-208ENST00000480104 NOD1Q9Y239 953 aa14.46□□□□□ -0.09
USP11-208ENST00000480104 CYP2E1P05181 493 aaPredicted RBP14.45□□□□□ -0.1
USP11-208ENST00000480104 MYL3P08590 195 aa14.45□□□□□ -0.1
USP11-208ENST00000480104 UBTFL1P0CB47 393 aaPredicted RBP14.45□□□□□ -0.1
USP11-208ENST00000480104 HTRA4P83105 476 aaPredicted RBP14.45□□□□□ -0.1
USP11-208ENST00000480104 FBXO16Q8IX29 292 aaPredicted RBP14.45□□□□□ -0.1
USP11-208ENST00000480104 AFAP1L1Q8TED9 768 aa14.45□□□□□ -0.1
USP11-208ENST00000480104 RIPOR3Q96MK2 946 aa14.45□□□□□ -0.1
USP11-208ENST00000480104 MTG1Q9BT17 334 aaPredicted RBP14.45□□□□□ -0.1
USP11-208ENST00000480104 PIH1D3Q9NQM4 214 aaKnown RBP14.45□□□□□ -0.1
USP11-208ENST00000480104 Q9Y3F1 56 aa14.45□□□□□ -0.1
USP11-208ENST00000480104 FLNBO75369 2602 aaKnown RBP14.45□□□□□ -0.1
USP11-208ENST00000480104 ASPMQ8IZT6 3477 aa14.45□□□□□ -0.1
USP11-208ENST00000480104 RAD21O60216 631 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 NBNO60934 754 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 EYA4O95677 639 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 CXCL10P02778 98 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 POLR3DP05423 398 aaPredicted RBP14.44□□□□□ -0.1
USP11-208ENST00000480104 AKR1B1P15121 316 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 ACAP1Q15027 740 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 PTPN21Q16825 1174 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 NFRKBQ6P4R8 1299 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.44□□□□□ -0.1
USP11-208ENST00000480104 LRRC8DQ7L1W4 858 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 FBXO11Q86XK2 927 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 TMEM192Q8IY95 271 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 CPXCR1Q8N123 301 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 FAM133AQ8N9E0 248 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 MSLNLQ96KJ4 702 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 SLF1Q9BQI6 1058 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 IGFLR1Q9H665 355 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 DLL3Q9NYJ7 618 aa14.44□□□□□ -0.1
USP11-208ENST00000480104 EFCAB14O75071 495 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 SELPP16109 830 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 ICAM3P32942 547 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 IQSEC1Q6DN90 963 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 TAPT1Q6NXT6 567 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 EEPD1Q7L9B9 569 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 CERS3Q8IU89 383 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 CCDC155Q8N6L0 562 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 SMRP1Q8NCR6 262 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 CAGE1Q8TC20 777 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 RPGRIP1Q96KN7 1286 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 NUP88Q99567 741 aaPredicted RBP14.43□□□□□ -0.1
USP11-208ENST00000480104 INCENPQ9NQS7 918 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 SCN10AQ9Y5Y9 1956 aa14.43□□□□□ -0.1
USP11-208ENST00000480104 NDUFV1P49821 464 aa14.42□□□□□ -0.1
USP11-208ENST00000480104 RRP1P56182 461 aaKnown RBP14.42□□□□□ -0.1
USP11-208ENST00000480104 IKBKEQ14164 716 aa14.42□□□□□ -0.1
USP11-208ENST00000480104 MYOCDQ8IZQ8 938 aa14.42□□□□□ -0.1
USP11-208ENST00000480104 CTAGE1Q96RT6 745 aa14.42□□□□□ -0.1
USP11-208ENST00000480104 RAVER2Q9HCJ3 691 aaKnown RBP14.42□□□□□ -0.1
USP11-208ENST00000480104 FBXO40Q9UH90 709 aa14.42□□□□□ -0.1
USP11-208ENST00000480104 PTPRCP08575 1304 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 ATG2AQ2TAZ0 1938 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 ASB14A6NK59 587 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 ATP2A1O14983 1001 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 CSPG5O95196 566 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 EEF2P13639 858 aaKnown RBP14.41□□□□□ -0.1
USP11-208ENST00000480104 DHX38Q92620 1227 aaKnown RBP14.41□□□□□ -0.1
USP11-208ENST00000480104 PHF7Q9BWX1 381 aaPredicted RBP14.41□□□□□ -0.1
USP11-208ENST00000480104 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
USP11-208ENST00000480104 HOMER2Q9NSB8 354 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 USP15Q9Y4E8 981 aaPredicted RBP14.41□□□□□ -0.1
USP11-208ENST00000480104 ZZEF1O43149 2961 aa14.41□□□□□ -0.1
USP11-208ENST00000480104 CYP2D6P10635 497 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 ZAP70P43403 619 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 CPT1AP50416 773 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 ADAM15Q13444 863 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 PTGISQ16647 500 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 TTC39AQ5SRH9 613 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 KIAA1211Q6ZU35 1233 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 MRPL50Q8N5N7 158 aaKnown RBP14.4□□□□□ -0.1
USP11-208ENST00000480104 CHST13Q8NET6 341 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 KCNG4Q8TDN1 519 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 YME1L1Q96TA2 773 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 MCM9Q9NXL9 1143 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 PCDHGC5Q9Y5F6 944 aa14.4□□□□□ -0.1
USP11-208ENST00000480104 CEP295Q9C0D2 2601 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms