RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 RAPGEF6Q8TEU7 1601 aa6.71□□□□□ -1.34
PRPF4B-205ENST00000480058 REREQ9P2R6 1566 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 ARHGAP10A1A4S6 786 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 TADA3O75528 432 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 ECEL1O95672 775 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 CYP2C19P33261 490 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 TFAP4Q01664 338 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 DHX9Q08211 1270 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 DDB1Q16531 1140 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 ZNF449Q6P9G9 518 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 PDIK1LQ8N165 341 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 TTC13Q8NBP0 860 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 PNMA1Q8ND90 353 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 LARP4BQ92615 738 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 TTC25Q96NG3 672 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 FMO2Q99518 471 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 WDR7Q9Y4E6 1490 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 SMCO2A6NFE2 343 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 E7ENQ6 273 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 CTIFO43310 598 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 PDE8BO95263 885 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 FMNL1O95466 1100 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 PTGDRQ13258 359 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 NLRX1Q86UT6 975 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 SDCCAG3Q96C92 435 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 NDE1Q9NXR1 346 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 NDUFA13Q9P0J0 144 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 TTI1O43156 1089 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 BYSLQ13895 437 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 CCDC124Q96CT7 223 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 ZFP91Q96JP5 570 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 OLFM3Q96PB7 478 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 PSMD1Q99460 953 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 TMEM206Q9H813 350 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 SH3GLB2Q9NR46 395 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 NSFL1CQ9UNZ2 370 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 SCINQ9Y6U3 715 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 CARMIL3Q8ND23 1372 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 MYOM2P54296 1465 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 LGALS16A8MUM7 142 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 MAPK13O15264 365 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 KRT37O76014 449 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 SERPING1P05155 500 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 RPS8P62241 208 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 EHHADHQ08426 723 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 LRRC23Q53EV4 343 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 ASPRV1Q53RT3 343 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 SEPT14Q6ZU15 432 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 FAM178BQ8IXR5 827 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 PDCD7Q8N8D1 485 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 CNOT6LQ96LI5 555 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 RILPQ96NA2 401 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 NT5C1BQ96P26 610 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 KRT12Q99456 494 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 L2HGDHQ9H9P8 463 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 WDR62O43379 1518 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 MFAP3P55082 362 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 CTAGE3PQ8IX95 158 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 ST13P4Q8IZP2 240 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 NME8Q8N427 588 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 MIGA1Q8NAN2 632 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 ARMC2Q8NEN0 867 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 NRBF2Q96F24 287 aa6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-205ENST00000480058 SYNGAP1Q96PV0 1343 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ADGRL3Q9HAR2 1447 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 DCAF8L1A6NGE4 600 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 SMIM24O75264 130 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 TTC4O95801 387 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ZAP70P43403 619 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 IRX1P78414 480 aaPredicted RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 BFSP1Q12934 665 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ALKBH5Q6P6C2 394 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 NSMCE1Q8WV22 266 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ADGRG1Q9Y653 693 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 PKP1Q13835 747 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 GNPTABQ3T906 1256 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 CCDC13Q8IYE1 715 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 TTC39CQ8N584 583 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 PHKBQ93100 1093 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 LSM14BQ9BX40 385 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 TSPYL2Q9H2G4 693 aaPredicted RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 NDST4Q9H3R1 872 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 EPB41L5Q9HCM4 733 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 DONSONQ9NYP3 566 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 BAG5Q9UL15 447 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 PPP1R37O75864 691 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 GGPS1O95749 300 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 MMP1P03956 469 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 CD19P15391 556 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 USP14P54578 494 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 HACE1Q8IYU2 909 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 GUF1Q8N442 669 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 KIF2CQ99661 725 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ABCB6Q9NP58 842 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms