RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 TDO2P48775 406 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 NKX3-2P78367 333 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
SMURF1-204ENST00000480055 GNASQ5JWF2 1037 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 FAM122AQ96E09 287 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
SMURF1-204ENST00000480055 NKX2-4Q9H2Z4 354 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 ABHD16BQ9H3Z7 469 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 ZNF287Q9HBT7 754 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
SMURF1-204ENST00000480055 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
SMURF1-204ENST00000480055 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 YBX2Q9Y2T7 364 aaKnown RBP12.31□□□□□ -0.44
SMURF1-204ENST00000480055 BRWD1Q9NSI6 2320 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 TRIP12Q14669 1992 aaPredicted RBP12.3□□□□□ -0.44
SMURF1-204ENST00000480055 SCN10AQ9Y5Y9 1956 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 PRDM1O75626 825 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 IGFBP4P22692 258 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 CYP2C18P33260 490 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
SMURF1-204ENST00000480055 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
SMURF1-204ENST00000480055 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 SBK1Q52WX2 424 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 KATNBL1Q9H079 304 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 SLC28A3Q9HAS3 691 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 ECHDC1Q9NTX5 307 aa12.3□□□□□ -0.44
SMURF1-204ENST00000480055 TET1Q8NFU7 2136 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 RNF113AO15541 343 aaKnown RBP12.29□□□□□ -0.44
SMURF1-204ENST00000480055 PSEN2P49810 448 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 GIMAP6Q6P9H5 292 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 ARMCX2Q7L311 632 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 LRRC47Q8N1G4 583 aaKnown RBP12.29□□□□□ -0.44
SMURF1-204ENST00000480055 SLC43A3Q8NBI5 491 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 CHST13Q8NET6 341 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 C1QTNF1Q9BXJ1 281 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 SLC38A10Q9HBR0 1119 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 XIRP2A4UGR9 3374 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 UMODL1Q5DID0 1318 aa12.29□□□□□ -0.44
SMURF1-204ENST00000480055 SIP14410 1827 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 TTLL1O95922 423 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 FGBP02675 491 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 BMP3P12645 472 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 BMP1P13497 986 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 GNAT2P19087 354 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 SLFN13Q68D06 897 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 CCDC144CPQ8IYA2 1237 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 KBTBD3Q8NAB2 608 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 APPBP2Q92624 585 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 OSBP2Q969R2 916 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
SMURF1-204ENST00000480055 HIPK3Q9H422 1215 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 ASTN1O14525 1302 aa12.28□□□□□ -0.44
SMURF1-204ENST00000480055 GPAA1O43292 621 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 SLC3A2P08195 630 aaKnown RBP12.27□□□□□ -0.45
SMURF1-204ENST00000480055 OAZ1P54368 228 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 BEX3Q00994 111 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 TNFAIP2Q03169 654 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 PDE4BQ07343 736 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 PPP2R2DQ66LE6 453 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 GPIHBP1Q8IV16 184 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 MKL1Q969V6 931 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 NOC4LQ9BVI4 516 aaKnown RBP12.27□□□□□ -0.45
SMURF1-204ENST00000480055 NACAP1Q9BZK3 213 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 AP5M1Q9H0R1 490 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 ACAD9Q9H845 621 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 MTMR4Q9NYA4 1195 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 PCDHA11Q9Y5I1 949 aa12.27□□□□□ -0.45
SMURF1-204ENST00000480055 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.26□□□□□ -0.45
SMURF1-204ENST00000480055 ASB14A6NK59 587 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
SMURF1-204ENST00000480055 M0R2C6 588 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 CABYRO75952 493 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
SMURF1-204ENST00000480055 STAT2P52630 851 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 RABGGTBP53611 331 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 TFF2Q03403 129 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 AAK1Q2M2I8 961 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
SMURF1-204ENST00000480055 CXCL17Q6UXB2 119 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 OTOP2Q7RTS6 562 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 IFNL3Q8IZI9 196 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 CHURC1Q8WUH1 139 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 SEZ6LQ9BYH1 1024 aa12.26□□□□□ -0.45
SMURF1-204ENST00000480055 GNEQ9Y223 722 aaKnown RBP12.26□□□□□ -0.45
SMURF1-204ENST00000480055 PPP1R3GB7ZBB8 358 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms