RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 SPATC1LQ9H0A9 340 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
CD46-214ENST00000480003 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 PNMA2Q9UL42 364 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
CD46-214ENST00000480003 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 JAK2O60674 1132 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 DEXIO95424 95 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 SLC25A27O95847 323 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 LBX1P52954 281 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 TKFCQ3LXA3 575 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 CCDC174Q6PII3 467 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
CD46-214ENST00000480003 FBXO11Q86XK2 927 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 CPXCR1Q8N123 301 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 SHCBP1Q8NEM2 672 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 SMCR8Q8TEV9 937 aaPredicted RBP11.08□□□□□ -0.64
CD46-214ENST00000480003 PIBF1Q8WXW3 757 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 COA7Q96BR5 231 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 SHISA4Q96DD7 197 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 BEGAINQ9BUH8 593 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 AMNQ9BXJ7 453 aa11.08□□□□□ -0.64
CD46-214ENST00000480003 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
CD46-214ENST00000480003 ORC3Q9UBD5 711 aaPredicted RBP11.08□□□□□ -0.64
CD46-214ENST00000480003 PTPDC1A2A3K4 754 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 HRO43593 1189 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 SCG2P13521 617 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
CD46-214ENST00000480003 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
CD46-214ENST00000480003 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 HOMER1Q86YM7 354 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
CD46-214ENST00000480003 RGS22Q8NE09 1264 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 CHST13Q8NET6 341 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 TRERF1Q96PN7 1200 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 PAGR1Q9BTK6 254 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 TEX13BQ9BXU2 312 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 SH3GLB2Q9NR46 395 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 BARHL2Q9NY43 387 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.07□□□□□ -0.64
CD46-214ENST00000480003 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
CD46-214ENST00000480003 PCDHA1Q9Y5I3 950 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 SMCHD1A6NHR9 2005 aa11.07□□□□□ -0.64
CD46-214ENST00000480003 GPR25O00155 361 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 STXBP3O00186 592 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 OPLAHO14841 1288 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 HSPA8P11142 646 aaKnown RBP11.06□□□□□ -0.64
CD46-214ENST00000480003 ALAS1P13196 640 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 TAL1P17542 331 aaPredicted RBP11.06□□□□□ -0.64
CD46-214ENST00000480003 ERCC3P19447 782 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 CCNA1P78396 465 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 GHRHRQ02643 423 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 TRAF1Q13077 416 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 WWC2Q6AWC2 1192 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 SNRNP48Q6IEG0 339 aaKnown RBP11.06□□□□□ -0.64
CD46-214ENST00000480003 FAM177A1Q8N128 213 aaPredicted RBP11.06□□□□□ -0.64
CD46-214ENST00000480003 SAMD3Q8N6K7 520 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 TBC1D5Q92609 795 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 ZDHHC16Q969W1 377 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 DDX11Q96FC9 970 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 AIFM3Q96NN9 605 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 MAF1Q9H063 256 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 PORCNQ9H237 461 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 SEC63Q9UGP8 760 aaKnown RBP11.06□□□□□ -0.64
CD46-214ENST00000480003 CCPG1Q9ULG6 757 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 MRPL11Q9Y3B7 192 aaKnown RBP11.06□□□□□ -0.64
CD46-214ENST00000480003 ABCB11O95342 1321 aa11.06□□□□□ -0.64
CD46-214ENST00000480003 PARP14Q460N5 1801 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 DPYSL4O14531 572 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 GJB2P29033 226 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 CTGFP29279 349 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 COPB2P35606 906 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 CAP1Q01518 475 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 SP3Q02447 781 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 BECN1Q14457 450 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 PLS1Q14651 629 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 WASF1Q92558 559 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 GPKOWQ92917 476 aaPredicted RBP eCLIP11.05□□□□□ -0.647e-22■□□□□ 10.2
CD46-214ENST00000480003 ABHD8Q96I13 439 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 ZMYND12Q9H0C1 365 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 MROH8Q9H579 483 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 EFCC1Q9HA90 598 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 GJD2Q9UKL4 321 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 SMC3Q9UQE7 1217 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 THSD7BQ9C0I4 1608 aa11.05□□□□□ -0.64
CD46-214ENST00000480003 ESYT2A0FGR8 921 aa11.04□□□□□ -0.64
CD46-214ENST00000480003 SMCO2A6NFE2 343 aa11.04□□□□□ -0.64
CD46-214ENST00000480003 STRNO43815 780 aa11.04□□□□□ -0.64
CD46-214ENST00000480003 MAPK4P31152 587 aa11.04□□□□□ -0.64
CD46-214ENST00000480003 SLC4A3P48751 1232 aa11.04□□□□□ -0.64
CD46-214ENST00000480003 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
CD46-214ENST00000480003 NPY5RQ15761 445 aa11.04□□□□□ -0.64
CD46-214ENST00000480003 USH1GQ495M9 461 aa11.04□□□□□ -0.64
CD46-214ENST00000480003 NCAPG2Q86XI2 1143 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms