RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
SP140-210ENST00000479539 GJA9P57773 515 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 EXOSC10Q01780 885 aaKnown RBP12.25□□□□□ -0.45
SP140-210ENST00000479539 GHRHRQ02643 423 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 KRT32Q14532 448 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 IQSEC1Q6DN90 963 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 CCSAPQ6IQ19 270 aaPredicted RBP12.25□□□□□ -0.45
SP140-210ENST00000479539 TAPT1Q6NXT6 567 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 SGMS1Q86VZ5 419 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 MCF2L2Q86YR7 1114 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 SYTL5Q8TDW5 730 aaPredicted RBP12.25□□□□□ -0.45
SP140-210ENST00000479539 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 NEK1Q96PY6 1258 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 TSEN34Q9BSV6 310 aaKnown RBP12.25□□□□□ -0.45
SP140-210ENST00000479539 UPF3AQ9H1J1 476 aaKnown RBP12.25□□□□□ -0.45
SP140-210ENST00000479539 VTA1Q9NP79 307 aa12.25□□□□□ -0.45
SP140-210ENST00000479539 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
SP140-210ENST00000479539 PNMA6FA0A0J9YX94 578 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.24□□□□□ -0.45
SP140-210ENST00000479539 CST5P28325 142 aaPredicted RBP12.24□□□□□ -0.45
SP140-210ENST00000479539 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
SP140-210ENST00000479539 TNFAIP2Q03169 654 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 LAMA4Q16363 1823 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 C1orf53Q5VUE5 145 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 DHX32Q7L7V1 743 aaKnown RBP12.24□□□□□ -0.45
SP140-210ENST00000479539 C7orf61Q8IZ16 206 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 PIGSQ96S52 555 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 PRO3102Q9H379 93 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 PDGFCQ9NRA1 345 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
SP140-210ENST00000479539 GNEQ9Y223 722 aaKnown RBP12.24□□□□□ -0.45
SP140-210ENST00000479539 Q9Y3F1 56 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 PCDHA1Q9Y5I3 950 aa12.24□□□□□ -0.45
SP140-210ENST00000479539 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
SP140-210ENST00000479539 RBM47A0AV96 593 aaKnown RBP12.23□□□□□ -0.45
SP140-210ENST00000479539 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 CCDC69A6NI79 296 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 OPLAHO14841 1288 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 CTAGE5O15320 804 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 EPB41L2O43491 1005 aaKnown RBP12.23□□□□□ -0.45
SP140-210ENST00000479539 SLC34A2O95436 690 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 SMPD1P17405 629 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 KIF5BP33176 963 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 HSPA4P34932 840 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 GNAQP50148 359 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 TRAF1Q13077 416 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 SNX17Q15036 470 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 KCNA10Q16322 511 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 ADCK5Q3MIX3 580 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 NFXL1Q6ZNB6 911 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 EEPD1Q7L9B9 569 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 FBXO16Q8IX29 292 aaPredicted RBP12.23□□□□□ -0.45
SP140-210ENST00000479539 SAMD3Q8N6K7 520 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 CTCFLQ8NI51 663 aaPredicted RBP12.23□□□□□ -0.45
SP140-210ENST00000479539 FERMT2Q96AC1 680 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 LZTS2Q9BRK4 669 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 SPZ1Q9BXG8 430 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 LRRC2Q9BYS8 371 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 SPC25Q9HBM1 224 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 MAP3K20Q9NYL2 800 aaKnown RBP12.23□□□□□ -0.45
SP140-210ENST00000479539 SLC12A7Q9Y666 1083 aa12.23□□□□□ -0.45
SP140-210ENST00000479539 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 B4DLN1 442 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 REC8O95072 547 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 HMGB1P09429 215 aaKnown RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 CALM1P0DP23 149 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 CALM2P0DP24 149 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 CALM3P0DP25 149 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
SP140-210ENST00000479539 HSD17B4P51659 736 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 MRPL12P52815 198 aaKnown RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 ACLYP53396 1101 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 RTP1P59025 263 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 HABP4Q5JVS0 413 aaKnown RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 PCSK9Q8NBP7 692 aaKnown RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 NSUN6Q8TEA1 469 aaKnown RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 TAAR1Q96RJ0 339 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 COL20A1Q9P218 1284 aa12.22□□□□□ -0.45
SP140-210ENST00000479539 ZMYND8Q9ULU4 1186 aaPredicted RBP12.22□□□□□ -0.45
SP140-210ENST00000479539 ELP1O95163 1332 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 A0A1W2PQ45 241 aaPredicted RBP12.21□□□□□ -0.45
SP140-210ENST00000479539 A0A1W2PQY0 241 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 DYNC1LI2O43237 492 aaPredicted RBP12.21□□□□□ -0.45
SP140-210ENST00000479539 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
SP140-210ENST00000479539 PDE4DQ08499 809 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 GNASQ5JWF2 1037 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 TMEM63BQ5T3F8 832 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
SP140-210ENST00000479539 SRBD1Q8N5C6 995 aaKnown RBP12.21□□□□□ -0.45
SP140-210ENST00000479539 FANCBQ8NB91 859 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms