RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MAP4K4O95819 1239 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-209ENST00000479532 ELNP15502 786 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 ALAS2P22557 587 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 TNNI2P48788 182 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 FZD5Q13467 585 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 TNFAIP1Q13829 316 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 C11orf91Q3C1V1 193 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 TTC22Q5TAA0 569 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 C1orf53Q5VUE5 145 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 CASC1Q6TDU7 716 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 ATCAYQ86WG3 371 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 LDHDQ86WU2 507 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 APOBEC3FQ8IUX4 373 aaKnown RBP7.39□□□□□ -1.23
SF3B1-209ENST00000479532 ETFBKMTQ8IXQ9 262 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 DCPSQ96C86 337 aaKnown RBP7.39□□□□□ -1.23
SF3B1-209ENST00000479532 NSUN4Q96CB9 384 aaKnown RBP7.39□□□□□ -1.23
SF3B1-209ENST00000479532 RBCK1Q9BYM8 510 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 NMRK2Q9NPI5 230 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 PRR12Q9ULL5 1215 aa7.39□□□□□ -1.23
SF3B1-209ENST00000479532 UTRNP46939 3433 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 GAKO14976 1311 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 PITPNM2Q9BZ72 1349 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 ZNF532Q9HCE3 1301 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 RNF113AO15541 343 aaKnown RBP7.38□□□□□ -1.23
SF3B1-209ENST00000479532 PDE6AP16499 860 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 ZNF16P17020 682 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-209ENST00000479532 ADD2P35612 726 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 BTDP43251 543 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 UBE3CQ15386 1083 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 TMC7Q7Z402 723 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 FCHSD1Q86WN1 690 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 TRPM4Q8TD43 1214 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 RUFY2Q8WXA3 655 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 EDC3Q96F86 508 aaKnown RBP7.38□□□□□ -1.23
SF3B1-209ENST00000479532 IFT43Q96FT9 208 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 ZCCHC2Q9C0B9 1178 aaKnown RBP7.38□□□□□ -1.23
SF3B1-209ENST00000479532 VEZTQ9HBM0 779 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 DIAPH3Q9NSV4 1193 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 KLF15Q9UIH9 416 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 DAGLAQ9Y4D2 1042 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 ADAMTSL1Q8N6G6 1762 aa7.38□□□□□ -1.23
SF3B1-209ENST00000479532 GPR75-ASB3A0A0A6YYF3 556 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 SHTN1A0MZ66 631 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 WNT10BO00744 389 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 PCBP4P57723 403 aaKnown RBP7.37□□□□□ -1.23
SF3B1-209ENST00000479532 GRIK5Q16478 980 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 BMP2KLQ5H9B9 411 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 ANGEL2Q5VTE6 544 aaKnown RBP7.37□□□□□ -1.23
SF3B1-209ENST00000479532 AMOTL1Q8IY63 956 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 TEX11Q8IYF3 940 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 SMC1BQ8NDV3 1235 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 APPBP2Q92624 585 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 HOOK2Q96ED9 719 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 CRNKL1Q9BZJ0 848 aaKnown RBP7.37□□□□□ -1.23
SF3B1-209ENST00000479532 AVENQ9NQS1 362 aaPredicted RBP7.37□□□□□ -1.23
SF3B1-209ENST00000479532 USP40Q9NVE5 1235 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 AATFQ9NY61 560 aaKnown RBP eCLIP7.37□□□□□ -1.23
SF3B1-209ENST00000479532 ZDHHC3Q9NYG2 299 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 GGA3Q9NZ52 723 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 PPP2R3BQ9Y5P8 575 aa7.37□□□□□ -1.23
SF3B1-209ENST00000479532 CLRN2A0PK11 232 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 TOMM70O94826 608 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 GNAT2P19087 354 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 SDSP20132 328 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 NF2P35240 595 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 USP5P45974 858 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 FSTL1Q12841 308 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 NBPF9Q3BBW0 867 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 CDC37L1Q7L3B6 337 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 KRT26Q7Z3Y9 468 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 MIGA1Q8NAN2 632 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 ZBED3Q96IU2 234 aaPredicted RBP7.36□□□□□ -1.23
SF3B1-209ENST00000479532 PRMT6Q96LA8 375 aaPredicted RBP7.36□□□□□ -1.23
SF3B1-209ENST00000479532 TDRD3Q9H7E2 651 aaKnown RBP7.36□□□□□ -1.23
SF3B1-209ENST00000479532 HELLSQ9NRZ9 838 aa7.36□□□□□ -1.23
SF3B1-209ENST00000479532 ZNF70Q9UC06 446 aaPredicted RBP7.36□□□□□ -1.23
SF3B1-209ENST00000479532 NAV1Q8NEY1 1877 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 TCRBV5S4A2TA0A5A2 114 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 TCP10L2B9ZVM9 353 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 ATXN7O15265 892 aaPredicted RBP7.35□□□□□ -1.23
SF3B1-209ENST00000479532 ENTPD3O75355 529 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 MBD4O95243 580 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 EGFRP00533 1210 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 GSPT1P15170 499 aaKnown RBP7.35□□□□□ -1.23
SF3B1-209ENST00000479532 DNM1Q05193 864 aaKnown RBP7.35□□□□□ -1.23
SF3B1-209ENST00000479532 PICALMQ13492 652 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 GRIK4Q16099 956 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 MCMDC2Q4G0Z9 681 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 FKBP1CQ5VVH2 108 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 APOBEC3HQ6NTF7 200 aaKnown RBP7.35□□□□□ -1.23
SF3B1-209ENST00000479532 CDC42EP5Q6NZY7 148 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 FAM83AQ86UY5 434 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 TREML1Q86YW5 311 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 EDEM1Q92611 657 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 CITED4Q96RK1 184 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 NACAP1Q9BZK3 213 aa7.35□□□□□ -1.23
SF3B1-209ENST00000479532 CRISPLD1Q9H336 500 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms