RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 OBP2AQ9NY56 170 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 GOLGA6AQ9NYA3 693 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 PRR13Q9NZ81 148 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 SF3B6Q9Y3B4 125 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 VSTM5A8MXK1 200 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 GPR85P60893 370 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 SART3Q15020 963 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 SVIPQ8NHG7 77 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 CHTF18Q8WVB6 975 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 COPS5Q92905 334 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 PSMG3-AS1Q96PY0 264 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 DSCC1Q9BVC3 393 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 ZNF700Q9H0M5 742 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 LGR6Q9HBX8 967 aa9.55□□□□□ -0.88
GAPVD1-217ENST00000479511 STXBP3O00186 592 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 MEIS1O00470 390 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 VSIG8P0DPA2 414 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 ATP2A2P16615 1042 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 HOXB4P17483 251 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 RAB6AP20340 208 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 AMPD1P23109 780 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 LSSP48449 732 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 BRD3Q15059 726 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 PCBP2Q15366 365 aaKnown RBP eCLIP9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 CXorf57Q6NSI4 855 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 IFNL3Q8IZI9 196 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 PCDH19Q8TAB3 1148 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 TIFAQ96CG3 184 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 ARPC5LQ9BPX5 153 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 NPFFR2Q9Y5X5 522 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 ST14Q9Y5Y6 855 aa9.54□□□□□ -0.88
GAPVD1-217ENST00000479511 PRAMEF1O95521 474 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 SRGAP2CP0DJJ0 459 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 GRIK1P39086 918 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 C4orf46Q504U0 113 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 FDX2Q6P4F2 183 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 CCDC103Q8IW40 242 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 ZC3H7AQ8IWR0 971 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 AGGF1Q8N302 714 aaeCLIP9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 CHST7Q9NS84 486 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 B4GALT6Q9UBX8 382 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
GAPVD1-217ENST00000479511 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 DYNC1LI2O43237 492 aaPredicted RBP9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 SIGLEC6O43699 453 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 GAS7O60861 476 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 LCP1P13796 627 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 CTSKP43235 329 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 DGKGP49619 791 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 MECP2P51608 486 aaKnown RBP9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 TMEM177Q53S58 311 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 ACBD5Q5T8D3 534 aaPredicted RBP9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 RSPO2Q6UXX9 243 aaPredicted RBP9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 ZFYVE21Q9BQ24 234 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 SLC13A1Q9BZW2 595 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 TCF7L1Q9HCS4 588 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 PRDM10Q9NQV6 1147 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 ZBTB21Q9ULJ3 1066 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 ERBB4Q15303 1308 aa9.52□□□□□ -0.89
GAPVD1-217ENST00000479511 KIF21AQ7Z4S6 1674 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 PF4V1P10720 104 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 NAT1P18440 290 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 VPS72Q15906 364 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 CREB3L3Q68CJ9 461 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 CDPF1Q6NVV7 123 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 HDGFL2Q7Z4V5 671 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 APBB1IPQ7Z5R6 666 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 CLRN3Q8NCR9 226 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 GPR27Q9NS67 375 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 ZKSCAN5Q9Y2L8 839 aa9.51□□□□□ -0.89
GAPVD1-217ENST00000479511 AURKAO14965 403 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 WIPF1O43516 503 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 SNUPNO95149 360 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 EOMESO95936 686 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 CD3EP07766 207 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 CT47B1P0C2W7 299 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 BCRP11274 1271 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 PREPP48147 710 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 RAC1P63000 192 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 POU4F1Q01851 419 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 KLF1Q13351 362 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 SAFB2Q14151 953 aaKnown RBP eCLIP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 ODF1Q14990 250 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 TESK1Q15569 626 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 CRTC3Q6UUV7 619 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 LBX2Q6XYB7 198 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 CPA6Q8N4T0 437 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 CHST14Q8NCH0 376 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 USP33Q8TEY7 942 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 AHCYL2Q96HN2 611 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 Q96M66 194 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 CELF4Q9BZC1 486 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 SEMA6CQ9H3T2 930 aa9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 H2AFY2Q9P0M6 372 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-217ENST00000479511 C2orf71A6NGG8 1288 aa9.49□□□□□ -0.89
GAPVD1-217ENST00000479511 MEFVO15553 781 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms