RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 CCDC69A6NI79 296 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 E7EWF7 191 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 RTP1P59025 263 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 FGD1P98174 961 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 PDE4DQ08499 809 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 BAATQ14032 418 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-208ENST00000479381 LRRC41Q15345 812 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 LRRC26Q2I0M4 334 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 HABP4Q5JVS0 413 aaKnown RBP10.58□□□□□ -0.72
CMTM1-208ENST00000479381 RNF20Q5VTR2 975 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 CYB5R4Q7L1T6 521 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 UBE2Q1Q7Z7E8 422 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-208ENST00000479381 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 ESYT1Q9BSJ8 1104 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 AP5M1Q9H0R1 490 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 STARD7Q9NQZ5 370 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-208ENST00000479381 TNRC18O15417 2968 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-208ENST00000479381 BRCA2P51587 3418 aa10.58□□□□□ -0.72
CMTM1-208ENST00000479381 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 NFIBO00712 420 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 CDC45O75419 566 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 ZNF865P0CJ78 1059 aaPredicted RBP10.57□□□□□ -0.72
CMTM1-208ENST00000479381 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
CMTM1-208ENST00000479381 EMP3P54852 163 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 MDM2Q00987 491 aaPredicted RBP10.57□□□□□ -0.72
CMTM1-208ENST00000479381 TNFAIP2Q03169 654 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 CCDC144BQ3MJ40 725 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 SLC30A10Q6XR72 485 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 SYNE3Q6ZMZ3 975 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 FBXO11Q86XK2 927 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 CTCFLQ8NI51 663 aaPredicted RBP10.57□□□□□ -0.72
CMTM1-208ENST00000479381 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 UBE2OQ9C0C9 1292 aaKnown RBP10.57□□□□□ -0.72
CMTM1-208ENST00000479381 CYP39A1Q9NYL5 469 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 ABCB11O95342 1321 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 SMCHD1A6NHR9 2005 aa10.57□□□□□ -0.72
CMTM1-208ENST00000479381 DNAJC25-GNG10A0A024R161 153 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 KLRF2D3W0D1 207 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 ZEB2O60315 1214 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 PQBP1O60828 265 aaKnown RBP10.56□□□□□ -0.72
CMTM1-208ENST00000479381 SNAI1O95863 264 aaPredicted RBP10.56□□□□□ -0.72
CMTM1-208ENST00000479381 NOVP48745 357 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 ALDH5A1P51649 535 aaPredicted RBP10.56□□□□□ -0.72
CMTM1-208ENST00000479381 TRIM60Q495X7 471 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 BMP2KLQ5H9B9 411 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 GNASQ5JWF2 1037 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 LCE2DQ5TA82 110 aaPredicted RBP10.56□□□□□ -0.72
CMTM1-208ENST00000479381 MAMDC4Q6UXC1 1216 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 MCF2L2Q86YR7 1114 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 FAM133AQ8N9E0 248 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 PCSK9Q8NBP7 692 aaKnown RBP10.56□□□□□ -0.72
CMTM1-208ENST00000479381 MARVELD3Q96A59 401 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 MRPL11Q9Y3B7 192 aaKnown RBP10.56□□□□□ -0.72
CMTM1-208ENST00000479381 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
CMTM1-208ENST00000479381 SOWAHBA6NEL2 793 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 PRC1O43663 620 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 DUSP11O75319 330 aaKnown RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 CFBP00751 764 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 SNHG28P0DPA3 235 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 KIF5BP33176 963 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 MCM5P33992 734 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 CHMP4BP1P59074 171 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 RPS6P62753 249 aaKnown RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 TRAF1Q13077 416 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 QRICH1Q2TAL8 776 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 BRDTQ58F21 947 aaPredicted RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 ARHGEF16Q5VV41 709 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 SLC39A5Q6ZMH5 540 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 MAP4K1Q92918 833 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 AMNQ9BXJ7 453 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
CMTM1-208ENST00000479381 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 SEC63Q9UGP8 760 aaKnown RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
CMTM1-208ENST00000479381 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-208ENST00000479381 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 MOXD2PA6NHM9 499 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 SLC27A2O14975 620 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
CMTM1-208ENST00000479381 DYNC1LI2O43237 492 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-208ENST00000479381 COL6A1P12109 1028 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 MAGEA10P43363 369 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-208ENST00000479381 BEX3Q00994 111 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 KCNA10Q16322 511 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 CREB3L3Q68CJ9 461 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 RAB11FIP4Q86YS3 637 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 ANKS1AQ92625 1134 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 MYL10Q9BUA6 226 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 LRRC2Q9BYS8 371 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms