RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 ASPRV1Q53RT3 343 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 TMEM31Q5JXX7 168 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 SPICE1Q8N0Z3 855 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
CDK11A-216ENST00000479362 LPAR1Q92633 364 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 GMCL1Q96IK5 515 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 PRDM5Q9NQX1 630 aaPredicted RBP12.05□□□□□ -0.48
CDK11A-216ENST00000479362 PDLIM7Q9NR12 457 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
CDK11A-216ENST00000479362 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
CDK11A-216ENST00000479362 BAZ2BQ9UIF8 2168 aaKnown RBP12.04□□□□□ -0.48
CDK11A-216ENST00000479362 TRIM43BA6NCK2 446 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
CDK11A-216ENST00000479362 CDKL5O76039 1030 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 BMP3P12645 472 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 MRE11P49959 708 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 GNAQP50148 359 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 ZNF543Q08ER8 600 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 CUL4AQ13619 759 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 GPATCH4Q5T3I0 446 aaKnown RBP12.04□□□□□ -0.48
CDK11A-216ENST00000479362 CPLX2Q6PUV4 134 aaKnown RBP12.04□□□□□ -0.48
CDK11A-216ENST00000479362 TMTC3Q6ZXV5 915 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 SH3RF1Q7Z6J0 888 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 USP6NLQ92738 828 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 TRIM43Q96BQ3 446 aaPredicted RBP12.04□□□□□ -0.48
CDK11A-216ENST00000479362 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
CDK11A-216ENST00000479362 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
CDK11A-216ENST00000479362 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 PEX10O60683 326 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 PLEKHA8P1O95397 391 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 VCAM1P19320 739 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 ITGB8P26012 769 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 ADD1P35611 737 aaKnown RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 ADGRE1Q14246 886 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 CCDC85BQ15834 202 aaPredicted RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 SH3D19Q5HYK7 790 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 KCTD1Q719H9 257 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 STAG2Q8N3U4 1231 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 GAS2L1Q99501 681 aaPredicted RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 NUP88Q99567 741 aaPredicted RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 LZTS2Q9BRK4 669 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 MORF4L1Q9UBU8 362 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
CDK11A-216ENST00000479362 CNTNAP5Q8WYK1 1306 aa12.03□□□□□ -0.48
CDK11A-216ENST00000479362 PTPDC1A2A3K4 754 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 KLRF2D3W0D1 207 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 DNM1LO00429 736 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 IKQ13123 557 aaPredicted RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 SNX17Q15036 470 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 TRIM60Q495X7 471 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 NSUN7Q8NE18 718 aaKnown RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 TIFAQ96CG3 184 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 IPO9Q96P70 1041 aaKnown RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 LLPHQ9BRT6 129 aaKnown RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 TANGO6Q9C0B7 1094 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 ASCC2Q9H1I8 757 aaPredicted RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.49
CDK11A-216ENST00000479362 CXXC1Q9P0U4 656 aaPredicted RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
CDK11A-216ENST00000479362 A0A0G2JMZ2 1700 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.01□□□□□ -0.49
CDK11A-216ENST00000479362 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 GPR37L1O60883 481 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 PPFIA3O75145 1194 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 CTDNEP1O95476 244 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 IFNAR1P17181 557 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 STAT2P52630 851 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 TFF2Q03403 129 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 NTRK3Q16288 839 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 TTBK2Q6IQ55 1244 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 SLC39A5Q6ZMH5 540 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 TRIM22Q8IYM9 498 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
CDK11A-216ENST00000479362 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 SRBD1Q8N5C6 995 aaKnown RBP12.01□□□□□ -0.49
CDK11A-216ENST00000479362 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 PHKBQ93100 1093 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
CDK11A-216ENST00000479362 SPZ1Q9BXG8 430 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 RPAP3Q9H6T3 665 aaPredicted RBP12.01□□□□□ -0.49
CDK11A-216ENST00000479362 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 SMC3Q9UQE7 1217 aa12.01□□□□□ -0.49
CDK11A-216ENST00000479362 STK36Q9NRP7 1315 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms