RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 DHX8Q14562 1220 aaKnown RBP11.13□□□□□ -0.63
RAD51B-208ENST00000479335 CABP7Q86V35 215 aa11.13□□□□□ -0.63
RAD51B-208ENST00000479335 GPC2Q8N158 579 aa11.13□□□□□ -0.63
RAD51B-208ENST00000479335 LPAR1Q92633 364 aa11.13□□□□□ -0.63
RAD51B-208ENST00000479335 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
RAD51B-208ENST00000479335 DEFB129Q9H1M3 183 aa11.13□□□□□ -0.63
RAD51B-208ENST00000479335 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
RAD51B-208ENST00000479335 HACL1Q9UJ83 578 aa11.13□□□□□ -0.63
RAD51B-208ENST00000479335 PPP2R3BQ9Y5P8 575 aa11.13□□□□□ -0.63
RAD51B-208ENST00000479335 ZNF500O60304 480 aaPredicted RBP11.12□□□□□ -0.63
RAD51B-208ENST00000479335 HOXA7P31268 230 aaPredicted RBP11.12□□□□□ -0.63
RAD51B-208ENST00000479335 AFMP43652 599 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
RAD51B-208ENST00000479335 UBE2SQ16763 222 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 TBC1D10BQ4KMP7 808 aaPredicted RBP11.12□□□□□ -0.63
RAD51B-208ENST00000479335 ISM2Q6H9L7 571 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 CRYGNQ8WXF5 182 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 CALML4Q96GE6 196 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 KBTBD4Q9NVX7 518 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 ZNF112Q9UJU3 913 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
RAD51B-208ENST00000479335 TBX3O15119 743 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 WDR46O15213 610 aaKnown RBP11.11□□□□□ -0.63
RAD51B-208ENST00000479335 EGFRP00533 1210 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 DSG3P32926 999 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 AMPD3Q01432 767 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 KCNB1Q14721 858 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 KARSQ15046 597 aaKnown RBP11.11□□□□□ -0.63
RAD51B-208ENST00000479335 NAALADL2Q58DX5 795 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 FAM83BQ5T0W9 1011 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 GRAMD1CQ8IYS0 662 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 RRAGDQ9NQL2 400 aaPredicted RBP11.11□□□□□ -0.63
RAD51B-208ENST00000479335 GPRC5DQ9NZD1 345 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 LRWD1Q9UFC0 647 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 DDX25Q9UHL0 483 aaKnown RBP11.11□□□□□ -0.63
RAD51B-208ENST00000479335 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
RAD51B-208ENST00000479335 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 ATAD5Q96QE3 1844 aa11.11□□□□□ -0.63
RAD51B-208ENST00000479335 SPDYE3A6NKU9 549 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 CBFA2T2O43439 604 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 TDP2O95551 362 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 CYP3A4P08684 503 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 FDX1P10109 184 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 CIITAP33076 1130 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 SREBF1P36956 1147 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 TECP42680 631 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 TXKP42681 527 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP14P54578 494 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 ARHGAP27Q6ZUM4 889 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 DRC7Q8IY82 874 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 SLFN12Q8IYM2 578 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 SPICE1Q8N0Z3 855 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 SAMD3Q8N6K7 520 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 RASSF8Q8NHQ8 419 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 MTRQ99707 1265 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 WDR18Q9BV38 432 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 LRRC27Q9C0I9 530 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
RAD51B-208ENST00000479335 IMPACTQ9P2X3 320 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 MYH7BA7E2Y1 1941 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 ABCB11O95342 1321 aa11.1□□□□□ -0.63
RAD51B-208ENST00000479335 SLC37A4O43826 429 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 CDC25AP30304 524 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 Q4G0T1 1027 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
RAD51B-208ENST00000479335 PRPF38AQ8NAV1 312 aaKnown RBP11.09□□□□□ -0.63
RAD51B-208ENST00000479335 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
RAD51B-208ENST00000479335 C7orf25Q9BPX7 421 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 HSD3B7Q9H2F3 369 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 TTC12Q9H892 705 aaPredicted RBP11.09□□□□□ -0.63
RAD51B-208ENST00000479335 EHMT1Q9H9B1 1298 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 PCDHA12Q9UN75 941 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
RAD51B-208ENST00000479335 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 PP2D1A8MPX8 630 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 OPLAHO14841 1288 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 MARCH6O60337 910 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 RPN1P04843 607 aaKnown RBP11.09□□□□□ -0.63
RAD51B-208ENST00000479335 PPP1R2P41236 205 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 FANCCQ00597 558 aa11.09□□□□□ -0.63
RAD51B-208ENST00000479335 CUL4BQ13620 913 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms