RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TNFAIP2Q03169 654 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 ITGA7Q13683 1181 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 FSCN1Q16658 493 aaKnown RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 B4GALNT3Q6L9W6 998 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 TAPT1Q6NXT6 567 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 RASGRP2Q7LDG7 609 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 TLK2Q86UE8 772 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 ANKRD35Q8N283 1001 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 KBTBD3Q8NAB2 608 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 PPP1R13LQ8WUF5 828 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 APPBP2Q92624 585 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 PURBQ96QR8 312 aaKnown RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 C1QTNF1Q9BXJ1 281 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 EPB41L4AQ9HCS5 686 aaPredicted RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 A1CFQ9NQ94 594 aaKnown RBP7.89□□□□□ -1.15
VCP-205ENST00000479300 HOMER2Q9NSB8 354 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 SLC4A7Q9Y6M7 1214 aa7.89□□□□□ -1.15
VCP-205ENST00000479300 FAM86C2PA6NEL3 165 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 DYNC1LI2O43237 492 aaPredicted RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 LPXNO60711 386 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 ZBED4O75132 1171 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 CYP2C9P11712 490 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 ATP2A2P16615 1042 aaKnown RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 TAP1Q03518 808 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 GIMAP6Q6P9H5 292 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 FBXO16Q8IX29 292 aaPredicted RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 ZNF444Q8N0Y2 327 aaPredicted RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 LRRC47Q8N1G4 583 aaKnown RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 CHST13Q8NET6 341 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 MKL1Q969V6 931 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 CEP95Q96GE4 821 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 STRBPQ96SI9 672 aaKnown RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 FSD1Q9BTV5 496 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 ALDH8A1Q9H2A2 487 aaPredicted RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 SPC25Q9HBM1 224 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 TRMT13Q9NUP7 481 aaKnown RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 CLIP2Q9UDT6 1046 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 PCDHB8Q9UN66 801 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 FARP1Q9Y4F1 1045 aaPredicted RBP7.88□□□□□ -1.15
VCP-205ENST00000479300 PCDHB13Q9Y5F0 798 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 TET1Q8NFU7 2136 aa7.88□□□□□ -1.15
VCP-205ENST00000479300 ZBBXA8MT70 800 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 PRDM1O75626 825 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 CABYRO75952 493 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 OAZ1P54368 228 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 SNAP25P60880 206 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 AAMPQ13685 434 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 SKIV2LQ15477 1246 aaKnown RBP7.87□□□□□ -1.15
VCP-205ENST00000479300 SBK1Q52WX2 424 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 MUM1L1Q5H9M0 696 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 ANKRD45Q5TZF3 282 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 EEPD1Q7L9B9 569 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 DEFB128Q7Z7B8 93 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 OSBP2Q969R2 916 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 CHMP4CQ96CF2 233 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 MTIF3Q9H2K0 278 aaKnown RBP7.87□□□□□ -1.15
VCP-205ENST00000479300 RNF146Q9NTX7 359 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 MTMR4Q9NYA4 1195 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 DAXXQ9UER7 740 aaPredicted RBP7.87□□□□□ -1.15
VCP-205ENST00000479300 FBXO40Q9UH90 709 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 FEM1BQ9UK73 627 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 ISY1Q9ULR0 285 aaKnown RBP7.87□□□□□ -1.15
VCP-205ENST00000479300 ARIH1Q9Y4X5 557 aaPredicted RBP7.87□□□□□ -1.15
VCP-205ENST00000479300 TANC1Q9C0D5 1861 aa7.87□□□□□ -1.15
VCP-205ENST00000479300 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 LCHNA4D1U4 455 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 PATL2C9JE40 543 aaKnown RBP7.86□□□□□ -1.15
VCP-205ENST00000479300 GPAA1O43292 621 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 MX1P20591 662 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 PDE4BQ07343 736 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 GRB10Q13322 594 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 GPNMBQ14956 572 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 TCTN1Q2MV58 587 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 TMEM67Q5HYA8 995 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 TMEM31Q5JXX7 168 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 PPP4R3BQ5MIZ7 849 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 TSHZ3Q63HK5 1081 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 NOL8Q76FK4 1167 aaKnown RBP7.86□□□□□ -1.15
VCP-205ENST00000479300 TMCO2Q7Z6W1 182 aaPredicted RBP7.86□□□□□ -1.15
VCP-205ENST00000479300 GMCL1P1Q8NEA9 526 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 MORC4Q8TE76 937 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 ARNTL2Q8WYA1 636 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 CTAGE1Q96RT6 745 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 CRBNQ96SW2 442 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 NAPBQ9H115 298 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 RWDD1Q9H446 243 aaPredicted RBP7.86□□□□□ -1.15
VCP-205ENST00000479300 ACAD9Q9H845 621 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 PCDHB15Q9Y5E8 787 aa7.86□□□□□ -1.15
VCP-205ENST00000479300 PLIN4Q96Q06 1357 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 TNKSO95271 1327 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 TMEM232C9JQI7 657 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 M0R2C6 588 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 GPR37L1O60883 481 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 TSPY3P0CV98 308 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 TSPY8P0CW00 308 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 BMP3P12645 472 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 PURAQ00577 322 aaKnown RBP7.85□□□□□ -1.15
VCP-205ENST00000479300 AAK1Q2M2I8 961 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 SLFN13Q68D06 897 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms