RNA–Protein interactions for RNA: ENST00000478548.1

MEN1-215, Transcript of menin 1, human

TSL 2

Gene MEN1, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEN1-215	ENST00000478548	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	MRPL11	Q9Y3B7	192 aa	Known RBP	27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	PCDHA1	Q9Y5I3	950 aa		27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	PTPDC1	A2A3K4	754 aa		27.7	■■■□□ 2.03
MEN1-215	ENST00000478548	CNGA1	P29973	690 aa		27.7	■■■□□ 2.03
MEN1-215	ENST00000478548	RCAN1	P53805	252 aa		27.7	■■■□□ 2.03
MEN1-215	ENST00000478548	FUT2	Q10981	343 aa		27.7	■■■□□ 2.03
MEN1-215	ENST00000478548	SYNE3	Q6ZMZ3	975 aa		27.7	■■■□□ 2.03
MEN1-215	ENST00000478548	DIS3L	Q8TF46	1054 aa	Known RBP	27.7	■■■□□ 2.03
MEN1-215	ENST00000478548	UPF3B	Q9BZI7	483 aa	Known RBP	27.7	■■■□□ 2.03
MEN1-215	ENST00000478548	LRRC37A2	A6NM11	1700 aa		27.7	■■■□□ 2.02
MEN1-215	ENST00000478548	CALML3	P27482	149 aa		27.69	■■■□□ 2.02
MEN1-215	ENST00000478548	CDC27	P30260	824 aa		27.69	■■■□□ 2.02
MEN1-215	ENST00000478548	ANAPC15	P60006	121 aa		27.69	■■■□□ 2.02
MEN1-215	ENST00000478548	COL20A1	Q9P218	1284 aa		27.69	■■■□□ 2.02
MEN1-215	ENST00000478548	CYP46A1	Q9Y6A2	500 aa		27.69	■■■□□ 2.02
MEN1-215	ENST00000478548	NID2	Q14112	1375 aa		27.69	■■■□□ 2.02
MEN1-215	ENST00000478548	FGD1	P98174	961 aa		27.68	■■■□□ 2.02
MEN1-215	ENST00000478548	ANKLE1	Q8NAG6	615 aa		27.68	■■■□□ 2.02
MEN1-215	ENST00000478548	PIBF1	Q8WXW3	757 aa		27.68	■■■□□ 2.02
MEN1-215	ENST00000478548	RBM28	Q9NW13	759 aa	Known RBP	27.68	■■■□□ 2.02
MEN1-215	ENST00000478548	CNPY2	Q9Y2B0	182 aa		27.68	■■■□□ 2.02
MEN1-215	ENST00000478548	ASB14	A6NK59	587 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	MSC	O60682	206 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	EIF5B	O60841	1220 aa	Known RBP	27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	ALDH5A1	P51649	535 aa	Predicted RBP	27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	ACVR2B	Q13705	512 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	RTN1	Q16799	776 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	PRPF38B	Q5VTL8	546 aa	Known RBP	27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	CCDC82	Q8N4S0	544 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	RRP36	Q96EU6	259 aa	Known RBP	27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	PAWR	Q96IZ0	340 aa	Known RBP	27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	ABHD16B	Q9H3Z7	469 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	CNTNAP5	Q8WYK1	1306 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	HSD17B4	P51659	736 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	ANO1	Q5XXA6	986 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	MCF2L2	Q86YR7	1114 aa		27.67	■■■□□ 2.02
MEN1-215	ENST00000478548	LOC102724159	A0A0B4J2E5	919 aa		27.66	■■■□□ 2.02
MEN1-215	ENST00000478548	GOLGA8A	A7E2F4	631 aa		27.66	■■■□□ 2.02
MEN1-215	ENST00000478548	GOLGA8B	A8MQT2	603 aa		27.66	■■■□□ 2.02
MEN1-215	ENST00000478548	ADD1	P35611	737 aa	Known RBP	27.66	■■■□□ 2.02
MEN1-215	ENST00000478548	PWP2	Q15269	919 aa	Known RBP	27.66	■■■□□ 2.02
MEN1-215	ENST00000478548	ADD3	Q9UEY8	706 aa	Known RBP	27.66	■■■□□ 2.02
MEN1-215	ENST00000478548	GTF3C3	Q9Y5Q9	886 aa		27.66	■■■□□ 2.02
MEN1-215	ENST00000478548	hCG_1642624	A0A1W2PR95	340 aa		27.65	■■■□□ 2.02
MEN1-215	ENST00000478548	ADCY6	O43306	1168 aa		27.65	■■■□□ 2.02
MEN1-215	ENST00000478548	EDNRB	P24530	442 aa		27.65	■■■□□ 2.02
MEN1-215	ENST00000478548	TRAF1	Q13077	416 aa		27.65	■■■□□ 2.02
MEN1-215	ENST00000478548	DNER	Q8NFT8	737 aa		27.65	■■■□□ 2.02
MEN1-215	ENST00000478548	TAAR1	Q96RJ0	339 aa		27.65	■■■□□ 2.02
MEN1-215	ENST00000478548	PDIA3	P30101	505 aa	Known RBP	27.64	■■■□□ 2.01
MEN1-215	ENST00000478548	METAP2	P50579	478 aa	Known RBP eCLIP	27.64	■■■□□ 2.01
MEN1-215	ENST00000478548	PPP2R5B	Q15173	497 aa		27.64	■■■□□ 2.01
MEN1-215	ENST00000478548	NECAB2	Q7Z6G3	386 aa		27.64	■■■□□ 2.01
MEN1-215	ENST00000478548	HTATIP2	Q9BUP3	242 aa		27.64	■■■□□ 2.01
MEN1-215	ENST00000478548	ZHX1	Q9UKY1	873 aa	Predicted RBP	27.64	■■■□□ 2.01
MEN1-215	ENST00000478548	CFB	P00751	764 aa		27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	AKR1A1	P14550	325 aa		27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	TAPT1	Q6NXT6	567 aa		27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	SAMD3	Q8N6K7	520 aa		27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	LENG1	Q96BZ8	264 aa	Predicted RBP	27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	PDRG1	Q9NUG6	133 aa		27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	MAP3K20	Q9NYL2	800 aa	Known RBP	27.63	■■■□□ 2.01
MEN1-215	ENST00000478548	CCDC144B	Q3MJ40	725 aa		27.62	■■■□□ 2.01
MEN1-215	ENST00000478548	DPF3	Q92784	378 aa		27.62	■■■□□ 2.01
MEN1-215	ENST00000478548	LARP6	Q9BRS8	491 aa	Known RBP	27.62	■■■□□ 2.01
MEN1-215	ENST00000478548	SEC63	Q9UGP8	760 aa	Known RBP	27.62	■■■□□ 2.01
MEN1-215	ENST00000478548	FAM184B	Q9ULE4	1060 aa		27.62	■■■□□ 2.01
MEN1-215	ENST00000478548	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.62	■■■□□ 2.01
MEN1-215	ENST00000478548	COL6A1	P12109	1028 aa		27.61	■■■□□ 2.01
MEN1-215	ENST00000478548	NTRK3	Q16288	839 aa		27.61	■■■□□ 2.01
MEN1-215	ENST00000478548	C11orf49	Q9H6J7	331 aa		27.61	■■■□□ 2.01
MEN1-215	ENST00000478548	PDGFC	Q9NRA1	345 aa		27.61	■■■□□ 2.01
MEN1-215	ENST00000478548	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.6	■■■□□ 2.01
MEN1-215	ENST00000478548	HOXA13	P31271	388 aa	Predicted RBP	27.6	■■■□□ 2.01
MEN1-215	ENST00000478548	EEPD1	Q7L9B9	569 aa		27.6	■■■□□ 2.01
MEN1-215	ENST00000478548	FBXO16	Q8IX29	292 aa	Predicted RBP	27.6	■■■□□ 2.01
MEN1-215	ENST00000478548		V9GY48	417 aa	Predicted RBP	27.6	■■■□□ 2.01
MEN1-215	ENST00000478548	RARB	P10826	455 aa		27.59	■■■□□ 2.01
MEN1-215	ENST00000478548	TMEM63B	Q5T3F8	832 aa		27.59	■■■□□ 2.01
MEN1-215	ENST00000478548	ZNF274	Q96GC6	653 aa	Predicted RBP	27.59	■■■□□ 2.01
MEN1-215	ENST00000478548	VTA1	Q9NP79	307 aa		27.59	■■■□□ 2.01
MEN1-215	ENST00000478548	CCDC196	A0A1B0GTZ2	297 aa		27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	RBM47	A0AV96	593 aa	Known RBP	27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	ADAMTS4	O75173	837 aa		27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	ADCYAP1R1	P41586	468 aa		27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	TYW1B	Q6NUM6	668 aa		27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	NSUN6	Q8TEA1	469 aa	Known RBP	27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	RMDN3	Q96TC7	470 aa		27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	XPNPEP3	Q9NQH7	507 aa		27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	PXMP2	Q9NR77	195 aa		27.58	■■■□□ 2.01
MEN1-215	ENST00000478548	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.57	■■■□□ 2
MEN1-215	ENST00000478548	MEIS2	O14770	477 aa		27.57	■■■□□ 2
MEN1-215	ENST00000478548	DUSP11	O75319	330 aa	Known RBP	27.57	■■■□□ 2
MEN1-215	ENST00000478548	POLR2M	P0CAP2	368 aa		27.57	■■■□□ 2
MEN1-215	ENST00000478548	CCT2	P78371	535 aa	Known RBP	27.57	■■■□□ 2
MEN1-215	ENST00000478548	LRRC41	Q15345	812 aa		27.57	■■■□□ 2
MEN1-215	ENST00000478548	GJC2	Q5T442	439 aa	Predicted RBP	27.57	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms