RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 RNF41Q9H4P4 317 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-212ENST00000478288 ZNF576Q9H609 170 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 PDGFCQ9NRA1 345 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 NFIBO00712 420 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-212ENST00000478288 EDNRBP24530 442 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 SLC16A2P36021 539 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 ZNF543Q08ER8 600 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 GRIN2CQ14957 1233 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
ABCF3-212ENST00000478288 AKNAD1Q5T1N1 836 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 KIAA1211Q6ZU35 1233 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 ZNF365Q70YC5 407 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 SMC5Q8IY18 1101 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 CHMP4CQ96CF2 233 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 MPHOSPH6Q99547 160 aaKnown RBP15.28■□□□□ 0.04
ABCF3-212ENST00000478288 PBX4Q9BYU1 374 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 TOMM22Q9NS69 142 aa15.28■□□□□ 0.04
ABCF3-212ENST00000478288 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.04
ABCF3-212ENST00000478288 NKRFO15226 690 aaKnown RBP eCLIP15.27■□□□□ 0.04
ABCF3-212ENST00000478288 B4GALT4O60513 344 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 CYP2C18P33260 490 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 CPT1AP50416 773 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 NMIQ13287 307 aaPredicted RBP15.27■□□□□ 0.04
ABCF3-212ENST00000478288 GPATCH4Q5T3I0 446 aaKnown RBP15.27■□□□□ 0.04
ABCF3-212ENST00000478288 MFSD6Q6ZSS7 791 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 EEPD1Q7L9B9 569 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 DNERQ8NFT8 737 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 CLEC4DQ8WXI8 215 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 NOC4LQ9BVI4 516 aaKnown RBP15.27■□□□□ 0.04
ABCF3-212ENST00000478288 WDR11Q9BZH6 1224 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 OSBPL3Q9H4L5 887 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 POLR3EQ9NVU0 708 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 MTMR7Q9Y216 660 aa15.27■□□□□ 0.04
ABCF3-212ENST00000478288 REV3LO60673 3130 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 RAD50Q92878 1312 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 KIAA1217Q5T5P2 1943 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 PTPDC1A2A3K4 754 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 RAB30Q15771 203 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 DGKHQ86XP1 1220 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 RGS22Q8NE09 1264 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 ESR2Q92731 530 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 PURBQ96QR8 312 aaKnown RBP15.26■□□□□ 0.03
ABCF3-212ENST00000478288 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
ABCF3-212ENST00000478288 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
ABCF3-212ENST00000478288 TANC1Q9C0D5 1861 aa15.26■□□□□ 0.03
ABCF3-212ENST00000478288 XIRP2A4UGR9 3374 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 B4DLN1 442 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 PFKMP08237 780 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 SUPT20HL2P0C7V6 817 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 ACRP10323 421 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 MRPL12P52815 198 aaKnown RBP15.25■□□□□ 0.03
ABCF3-212ENST00000478288 HAND2P61296 217 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 RPS6P62753 249 aaKnown RBP15.25■□□□□ 0.03
ABCF3-212ENST00000478288 PURAQ00577 322 aaKnown RBP15.25■□□□□ 0.03
ABCF3-212ENST00000478288 BRDTQ58F21 947 aaPredicted RBP15.25■□□□□ 0.03
ABCF3-212ENST00000478288 CCDC178Q5BJE1 867 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 TBC1D10CQ8IV04 446 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 RPUSD2Q8IZ73 545 aaKnown RBP15.25■□□□□ 0.03
ABCF3-212ENST00000478288 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
ABCF3-212ENST00000478288 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 TRPV6Q9H1D0 765 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 WNT8AQ9H1J5 351 aa15.25■□□□□ 0.03
ABCF3-212ENST00000478288 UMODL1Q5DID0 1318 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 KPNA6O60684 536 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 FGBP02675 491 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 SDSP20132 328 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 PTGS1P23219 599 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 PBX2P40425 430 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 PPP2R5BQ15173 497 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 TMEM63BQ5T3F8 832 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 SCFD2Q8WU76 684 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 ANKS1AQ92625 1134 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 GAS2L1Q99501 681 aaPredicted RBP15.24■□□□□ 0.03
ABCF3-212ENST00000478288 MTG1Q9BT17 334 aaPredicted RBP15.24■□□□□ 0.03
ABCF3-212ENST00000478288 MSRAQ9UJ68 235 aa15.24■□□□□ 0.03
ABCF3-212ENST00000478288 TNKSO95271 1327 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 NEDD4P46934 1319 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 SCN5AQ14524 2016 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 A6NJR5 290 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 GRXCR1A8MXD5 290 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 HIP1O00291 1037 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 ZNF213O14771 459 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 CALML3P27482 149 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 PSMC6P62333 389 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 PDE4DQ08499 809 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 NFRKBQ6P4R8 1299 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 IQCA1Q86XH1 822 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 OR6J1Q8NGC5 347 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 RILPL2Q969X0 211 aa15.23■□□□□ 0.03
ABCF3-212ENST00000478288 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-212ENST00000478288 CXXC1Q9P0U4 656 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-212ENST00000478288 TRIP12Q14669 1992 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-212ENST00000478288 TET1Q8NFU7 2136 aa15.22■□□□□ 0.03
ABCF3-212ENST00000478288 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
ABCF3-212ENST00000478288 RFC2P35250 354 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms