RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 FEM1BQ9UK73 627 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 DDX49Q9Y6V7 483 aaKnown RBP11.27□□□□□ -0.61
TCTN3-205ENST00000478245 TCRBV5S4A2TA0A5A2 114 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 GOLIM4O00461 696 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
TCTN3-205ENST00000478245 CHMP4BP1P59074 171 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 ZP2Q05996 745 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 LRRFIP1Q32MZ4 808 aaKnown RBP11.26□□□□□ -0.61
TCTN3-205ENST00000478245 BRDTQ58F21 947 aaPredicted RBP11.26□□□□□ -0.61
TCTN3-205ENST00000478245 CCDC155Q8N6L0 562 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 NEK9Q8TD19 979 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 PPP1R13LQ8WUF5 828 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
TCTN3-205ENST00000478245 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 DNAJC2Q99543 621 aaKnown RBP11.26□□□□□ -0.61
TCTN3-205ENST00000478245 VTA1Q9NP79 307 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 RNF146Q9NTX7 359 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
TCTN3-205ENST00000478245 WDR87Q6ZQQ6 2873 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 FAM186AA6NE01 2351 aa11.26□□□□□ -0.61
TCTN3-205ENST00000478245 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 GJB5O95377 273 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 FDX1P10109 184 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 ALAS1P13196 640 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 TRIM27P14373 513 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 DEFB103AP81534 67 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 IKQ13123 557 aaPredicted RBP11.25□□□□□ -0.61
TCTN3-205ENST00000478245 PTPROQ16827 1216 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 DUSP28Q4G0W2 176 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 FAM117BQ6P1L5 589 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 NFRKBQ6P4R8 1299 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 ADHFE1Q8IWW8 467 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 STK11IPQ8N1F8 1099 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 PRSS33Q8NF86 280 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 MRPL38Q96DV4 380 aaKnown RBP11.25□□□□□ -0.61
TCTN3-205ENST00000478245 PRRX2Q99811 253 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
TCTN3-205ENST00000478245 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 LCTP09848 1927 aa11.25□□□□□ -0.61
TCTN3-205ENST00000478245 GFRA3O60609 400 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 IRS1P35568 1242 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 PTPN11Q06124 597 aaPredicted RBP11.24□□□□□ -0.61
TCTN3-205ENST00000478245 TKFCQ3LXA3 575 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 TIGD5Q53EQ6 642 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 CNKSR3Q6P9H4 555 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 CTR9Q6PD62 1173 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 ERC1Q8IUD2 1116 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 TRMT2AQ8IZ69 625 aaKnown RBP11.24□□□□□ -0.61
TCTN3-205ENST00000478245 OR6J1Q8NGC5 347 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 WDR11Q9BZH6 1224 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 TNNQ9UQP3 1299 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 RAD50Q92878 1312 aa11.24□□□□□ -0.61
TCTN3-205ENST00000478245 ABHD14A-ACY1A0A1B0GW23 586 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 TMEM232C9JQI7 657 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 KPNA6O60684 536 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 BMP3P12645 472 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 RASA1P20936 1047 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 PTGISQ16647 500 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 SLFNL1Q499Z3 407 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 NSMFQ6X4W1 530 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 CAGE1Q8TC20 777 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 PABPC5Q96DU9 382 aaKnown RBP11.23□□□□□ -0.61
TCTN3-205ENST00000478245 POP1Q99575 1024 aaKnown RBP11.23□□□□□ -0.61
TCTN3-205ENST00000478245 C17orf80Q9BSJ5 609 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
TCTN3-205ENST00000478245 MUTYHQ9UIF7 546 aa11.23□□□□□ -0.61
TCTN3-205ENST00000478245 EFCAB14O75071 495 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 PARNO95453 639 aaKnown RBP11.22□□□□□ -0.61
TCTN3-205ENST00000478245 SELPP16109 830 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 ADD2P35612 726 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 STAT2P52630 851 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 IKBKEQ14164 716 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 IER5LQ5T953 404 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 LRRC8DQ7L1W4 858 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 SUGP1Q8IWZ8 645 aaKnown RBP11.22□□□□□ -0.61
TCTN3-205ENST00000478245 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
TCTN3-205ENST00000478245 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 CHURC1Q8WUH1 139 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 PBXIP1Q96AQ6 731 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 BCL11AQ9H165 835 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 CLDND1Q9NY35 253 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 CYP39A1Q9NYL5 469 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 ARPP21Q9UBL0 812 aaPredicted RBP11.22□□□□□ -0.61
TCTN3-205ENST00000478245 INSL6Q9Y581 213 aa11.22□□□□□ -0.61
TCTN3-205ENST00000478245 PKN1Q16512 942 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
TCTN3-205ENST00000478245 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 MUM1L1Q5H9M0 696 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 SLFN13Q68D06 897 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms