RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FDX1P10109 184 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 STAT2P52630 851 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 GSDMDP57764 484 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 GRIN1Q05586 938 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 PNOCQ13519 176 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 R3HDM1Q15032 1099 aaKnown RBP8.97□□□□□ -0.97
VMA21-203ENST00000477649 E2F4Q16254 413 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 CDC37Q16543 378 aaPredicted RBP8.97□□□□□ -0.97
VMA21-203ENST00000477649 QRICH1Q2TAL8 776 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 LETM2Q2VYF4 491 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 RRAGBQ5VZM2 374 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 FBXO11Q86XK2 927 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 LPAR1Q92633 364 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 DHX58Q96C10 678 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 PAGE5Q96GU1 130 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 EPSTI1Q96J88 318 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 MAF1Q9H063 256 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 EHMT1Q9H9B1 1298 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 DISC1Q9NRI5 854 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 STK17AQ9UEE5 414 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 FEM1BQ9UK73 627 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 MAN1B1Q9UKM7 699 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 BCS1LQ9Y276 419 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 RABGAP1Q9Y3P9 1069 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 PCDHA1Q9Y5I3 950 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 FER1L6Q2WGJ9 1857 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 ADAMTSL1Q8N6G6 1762 aa8.96□□□□□ -0.97
VMA21-203ENST00000477649 SIPA1L1O43166 1804 aa8.96□□□□□ -0.97
VMA21-203ENST00000477649 CYP3A7-CYP3A51PA0A087WV96 503 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 NRDCO43847 1150 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 CTNND1O60716 968 aaKnown RBP8.96□□□□□ -0.98
VMA21-203ENST00000477649 CYP3A7P24462 503 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 STAT6P42226 847 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 DPYDQ12882 1025 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 KCNB1Q14721 858 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 CALCRLQ16602 461 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 TTBK2Q6IQ55 1244 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 KCTD1Q719H9 257 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 APOBEC3FQ8IUX4 373 aaKnown RBP8.96□□□□□ -0.98
VMA21-203ENST00000477649 SLFN12Q8IYM2 578 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 AOPEPQ8N6M6 819 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 PDILTQ8N807 584 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 IGSF22Q8N9C0 903 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 RASSF8Q8NHQ8 419 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 RASGRP4Q8TDF6 673 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 COA7Q96BR5 231 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 CALML4Q96GE6 196 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 MTMR9Q96QG7 549 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 VCPKMTQ9H867 229 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 MAP3K20Q9NYL2 800 aaKnown RBP8.96□□□□□ -0.98
VMA21-203ENST00000477649 BIN2Q9UBW5 565 aaPredicted RBP8.96□□□□□ -0.98
VMA21-203ENST00000477649 PGAP2Q9UHJ9 254 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 COL4A5P29400 1685 aa8.96□□□□□ -0.98
VMA21-203ENST00000477649 BRCA1P38398 1863 aaKnown RBP8.96□□□□□ -0.98
VMA21-203ENST00000477649 SPDYE3A6NKU9 549 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 TMEM232C9JQI7 657 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 GDF11O95390 407 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 USP14P54578 494 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 IKQ13123 557 aaPredicted RBP8.95□□□□□ -0.98
VMA21-203ENST00000477649 STIM1Q13586 685 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 RASA3Q14644 834 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 NCAPHQ15003 741 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 NOM1Q5C9Z4 860 aaKnown RBP8.95□□□□□ -0.98
VMA21-203ENST00000477649 SPECC1Q5M775 1068 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 JAKMIP3Q5VZ66 844 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 PDXDC2PQ6P474 469 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 CABP7Q86V35 215 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 CLEC10AQ8IUN9 316 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 DRC7Q8IY82 874 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 MBOAT7Q96N66 472 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 KIAA1683Q9H0B3 1180 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 NT5C3AQ9H0P0 336 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 DEFB129Q9H1M3 183 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 CPVLQ9H3G5 476 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 SPON1Q9HCB6 807 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 KBTBD4Q9NVX7 518 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 PPP1R1BQ9UD71 204 aaPredicted RBP8.95□□□□□ -0.98
VMA21-203ENST00000477649 MRPL11Q9Y3B7 192 aaKnown RBP8.95□□□□□ -0.98
VMA21-203ENST00000477649 KDM3AQ9Y4C1 1321 aa8.95□□□□□ -0.98
VMA21-203ENST00000477649 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 BIN1O00499 593 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 WNT7AO00755 349 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 WDR46O15213 610 aaKnown RBP8.94□□□□□ -0.98
VMA21-203ENST00000477649 RAD21O60216 631 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 MARCH6O60337 910 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 PPP1R11O60927 126 aaPredicted RBP8.94□□□□□ -0.98
VMA21-203ENST00000477649 LMNB1P20700 586 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 CIITAP33076 1130 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 SLC16A2P36021 539 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 GMPSP49915 693 aaPredicted RBP8.94□□□□□ -0.98
VMA21-203ENST00000477649 SPAG1Q07617 926 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 IL17AQ16552 155 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 KIF4BQ2VIQ3 1234 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 ZNF658Q5TYW1 1059 aaPredicted RBP8.94□□□□□ -0.98
VMA21-203ENST00000477649 SPATA1Q5VX52 437 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 KRT79Q5XKE5 535 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 DPY19L2Q6NUT2 758 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 CNNM4Q6P4Q7 775 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 USP49Q70CQ1 688 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 MICALL2Q8IY33 904 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms