RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 NAALADL2Q58DX5 795 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 FOXR1Q6PIV2 292 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 MMS22LQ6ZRQ5 1243 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 CCDC84Q86UT8 332 aaPredicted RBP15.07■□□□□ 0
HLA-DMA-208ENST00000477541 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.07■□□□□ 0
HLA-DMA-208ENST00000477541 CCDC42Q96M95 316 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 C7orf25Q9BPX7 421 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 SH2D4AQ9H788 454 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 JADE2Q9NQC1 790 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 ZBTB1Q9Y2K1 713 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 CCDC194A0A1B0GVG4 234 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 EIF3HO15372 352 aaKnown RBP eCLIP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 SWT1Q5T5J6 900 aaKnown RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 EMC10Q5UCC4 262 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 CNNM4Q6P4Q7 775 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 B4GALNT4Q76KP1 1039 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 PACS2Q86VP3 889 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 CREG2Q8IUH2 290 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 RNF10Q8N5U6 811 aaKnown RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 DUSP9Q99956 384 aaKnown RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 DEF6Q9H4E7 631 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 B4DLN1 442 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 M0R2N6 131 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 GUCY2CP25092 1073 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 PAFAH1B1P43034 410 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 GTF2A1P52655 376 aaPredicted RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 CHRNDQ07001 517 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 DGKHQ86XP1 1220 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 RASSF8Q8NHQ8 419 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 CAPZA3Q96KX2 299 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 CNOT6LQ96LI5 555 aaKnown RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 RUFY1Q96T51 708 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 LZTS2Q9BRK4 669 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 PAGR1Q9BTK6 254 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 LACRTQ9GZZ8 138 aa15.06■□□□□ 0
HLA-DMA-208ENST00000477541 NUCKS1Q9H1E3 243 aaKnown RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 LUC7LQ9NQ29 371 aaKnown RBP15.06■□□□□ 0
HLA-DMA-208ENST00000477541 CCDC88AQ3V6T2 1871 aa15.05■□□□□ 0
HLA-DMA-208ENST00000477541 TRIM49BA6NDI0 452 aa15.05■□□□□ -0
HLA-DMA-208ENST00000477541 PES1O00541 588 aaKnown RBP15.05■□□□□ -0
HLA-DMA-208ENST00000477541 HSF2BPO75031 334 aa15.05■□□□□ -0
HLA-DMA-208ENST00000477541 MTIF2P46199 727 aaKnown RBP15.05■□□□□ -0
HLA-DMA-208ENST00000477541 ADGRA1Q86SQ6 560 aa15.05■□□□□ -0
HLA-DMA-208ENST00000477541 EIF1ADQ8N9N8 165 aaKnown RBP15.05■□□□□ -0
HLA-DMA-208ENST00000477541 CEP89Q96ST8 783 aa15.05■□□□□ -0
HLA-DMA-208ENST00000477541 NOC4LQ9BVI4 516 aaKnown RBP15.05■□□□□ -0
HLA-DMA-208ENST00000477541 TCP11L1Q9NUJ3 509 aa15.05■□□□□ -0
HLA-DMA-208ENST00000477541 STIM2Q9P246 746 aa15.05■□□□□ -0
HLA-DMA-208ENST00000477541 SSU72P8A0A1W2PR75 194 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 PDE2AO00408 941 aaPredicted RBP15.04■□□□□ -0
HLA-DMA-208ENST00000477541 SRGAP2O75044 1071 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 PMS1P54277 932 aaKnown RBP15.04■□□□□ -0
HLA-DMA-208ENST00000477541 EVA1CP58658 441 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 CAVIN4Q5BKX8 364 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 MREGQ8N565 214 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 SPATA4Q8NEY3 305 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 IFIH1Q9BYX4 1025 aaKnown RBP15.04■□□□□ -0
HLA-DMA-208ENST00000477541 KAT14Q9H8E8 782 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 GGA2Q9UJY4 613 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 PCDHA13Q9Y5I0 950 aa15.04■□□□□ -0
HLA-DMA-208ENST00000477541 RASSF10A6NK89 507 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 CCDC96Q2M329 555 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 MIIPQ5JXC2 388 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 CCDC181Q5TID7 509 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 SUSD4Q5VX71 490 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 MICALCLQ6ZW33 695 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 SND1Q7KZF4 910 aaKnown RBP eCLIP15.03■□□□□ -0
HLA-DMA-208ENST00000477541 CD302Q8IX05 232 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 OSBPL9Q96SU4 736 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 AGPAT5Q9NUQ2 364 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 COL1A1P02452 1464 aaPredicted RBP15.03■□□□□ -0
HLA-DMA-208ENST00000477541 WNK3Q9BYP7 1800 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 GRID2IPA4D2P6 1211 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 RCCD1A6NED2 376 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 ERLIN2O94905 339 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 C2orf54Q08AI8 447 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
HLA-DMA-208ENST00000477541 GRM4Q14833 912 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 CENPPQ6IPU0 288 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 KRT25Q7Z3Z0 450 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 IFT20Q8IY31 132 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 PCMTD1Q96MG8 357 aaPredicted RBP15.03■□□□□ -0
HLA-DMA-208ENST00000477541 TRIM9Q9C026 710 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 LRRC27Q9C0I9 530 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 GEMIN8Q9NWZ8 242 aaKnown RBP15.03■□□□□ -0
HLA-DMA-208ENST00000477541 ABCF2Q9UG63 623 aa15.03■□□□□ -0
HLA-DMA-208ENST00000477541 GRIN2DO15399 1336 aa15.02■□□□□ -0
HLA-DMA-208ENST00000477541 FLT1P17948 1338 aa15.02■□□□□ -0
HLA-DMA-208ENST00000477541 PVALEFA0A1B0GWK0 134 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 RGL2O15211 777 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 COBLO75128 1261 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 MYBL2P10244 700 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 KIF11P52732 1056 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 LRRC63Q05C16 580 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 PDE4DQ08499 809 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 MAN2A1Q16706 1144 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 YTHDF3Q7Z739 585 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms