RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 PHIPQ8WWQ0 1821 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 DOCK1Q14185 1865 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 VCAM1P19320 739 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 TECP42680 631 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 KRT25Q7Z3Z0 450 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 CNNM3Q8NE01 707 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 CCDC12Q8WUD4 166 aaPredicted RBP13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 CUL5Q93034 780 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 TANGO6Q9C0B7 1094 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
TNRC6A-206ENST00000477487 TXKP42681 527 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 SASS6Q6UVJ0 657 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 NUDT12Q9BQG2 462 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 RRAGDQ9NQL2 400 aaPredicted RBP13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 CEP131Q9UPN4 1083 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 PCDHA5Q9Y5H7 936 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 ZNF536O15090 1300 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 COBLO75128 1261 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 CFBP00751 764 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 SCYL3Q8IZE3 742 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 TRIM44Q96DX7 344 aaPredicted RBP13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 BLZF1Q9H2G9 400 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
TNRC6A-206ENST00000477487 POTEMA6NI47 508 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 LETM1O95202 739 aaPredicted RBP13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 TRAPPC10P48553 1259 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 GALNT17Q6IS24 598 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 PLCD4Q9BRC7 762 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 RPAP3Q9H6T3 665 aaPredicted RBP13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 VGLL4Q14135 290 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 PPP4R3BQ5MIZ7 849 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 ANO3Q9BYT9 981 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 OTOFQ9HC10 1997 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 TRAF5O00463 557 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 NFIBO00712 420 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 NEMFO60524 1076 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 FLOT1O75955 427 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 EPHX2P34913 555 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 LDHDQ86WU2 507 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 HAS1Q92839 578 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 PPP1R9BQ96SB3 815 aa13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 RANBP17Q9H2T7 1088 aaKnown RBP13.41□□□□□ -0.26
TNRC6A-206ENST00000477487 ZNF165P49910 485 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 MUM1L1Q5H9M0 696 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 ATG4CQ96DT6 458 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 KIAA1683Q9H0B3 1180 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 FAM13BQ9NYF5 915 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 COL20A1Q9P218 1284 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 RIPK3Q9Y572 518 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 SNCAIPQ9Y6H5 919 aa13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 COL11A1P12107 1806 aaPredicted RBP13.4□□□□□ -0.26
TNRC6A-206ENST00000477487 OR52Z1P0C646 297 aa13.4□□□□□ -0.27
TNRC6A-206ENST00000477487 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.27
TNRC6A-206ENST00000477487 E2F4Q16254 413 aa13.4□□□□□ -0.27
TNRC6A-206ENST00000477487 NAALADL2Q58DX5 795 aa13.4□□□□□ -0.27
TNRC6A-206ENST00000477487 FERMT2Q96AC1 680 aa13.4□□□□□ -0.27
TNRC6A-206ENST00000477487 DCPSQ96C86 337 aaKnown RBP13.4□□□□□ -0.27
TNRC6A-206ENST00000477487 R3HDMLQ9H3Y0 253 aa13.4□□□□□ -0.27
TNRC6A-206ENST00000477487 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 STAT3P40763 770 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 BACE1P56817 501 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 IQCB1Q15051 598 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 HSP90AA4PQ58FG1 418 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 DTHD1Q6ZMT9 781 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 HOOK2Q96ED9 719 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 MTMR9Q96QG7 549 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 TRAIPQ9BWF2 469 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 RLFQ13129 1914 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 ECM1Q16610 540 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 MAP1SQ66K74 1059 aaPredicted RBP13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 DHX40Q8IX18 779 aaKnown RBP13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 PAGE5Q96GU1 130 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 ELP3Q9H9T3 547 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 PICK1Q9NRD5 415 aa13.39□□□□□ -0.27
TNRC6A-206ENST00000477487 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
TNRC6A-206ENST00000477487 hCG_1984214I3L0E3 225 aa13.38□□□□□ -0.27
TNRC6A-206ENST00000477487 POSTNQ15063 836 aa13.38□□□□□ -0.27
TNRC6A-206ENST00000477487 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
TNRC6A-206ENST00000477487 TREML2Q5T2D2 321 aa13.38□□□□□ -0.27
TNRC6A-206ENST00000477487 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms