RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 FOXO4P98177 505 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 TP53I13Q8NBR0 393 aaPredicted RBP6.83□□□□□ -1.32
UBR3-209ENST00000477461 ADAM7Q9H2U9 754 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 GULP1Q9UBP9 304 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 FBLN5Q9UBX5 448 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 CGGBP1Q9UFW8 167 aaPredicted RBP6.83□□□□□ -1.32
UBR3-209ENST00000477461 FFAR3O14843 346 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 VAMP1P23763 118 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 IGFBP6P24592 240 aaPredicted RBP6.82□□□□□ -1.32
UBR3-209ENST00000477461 AMPD2Q01433 879 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 TARBP2Q15633 366 aaKnown RBP6.82□□□□□ -1.32
UBR3-209ENST00000477461 EEF1DP3Q658K8 133 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 NLGN2Q8NFZ4 835 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 RASGRP4Q8TDF6 673 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 SHDQ96IW2 340 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 KRTAP4-2Q9BYR5 136 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 SUSD2Q9UGT4 822 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
UBR3-209ENST00000477461 SRGAP3O43295 1099 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 RCSD1Q6JBY9 416 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 VHLLQ6RSH7 139 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 ARHGEF39Q8N4T4 335 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 LZTR1Q8N653 840 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 FAM169BQ8N8A8 192 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 USP33Q8TEY7 942 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 ALG3Q92685 438 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 SPATA32Q96LK8 384 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 GPRC5CQ9NQ84 441 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 APEX2Q9UBZ4 518 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 AKT3Q9Y243 479 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 BACE2Q9Y5Z0 518 aa6.81□□□□□ -1.32
UBR3-209ENST00000477461 KCNH1O95259 989 aa6.8□□□□□ -1.32
UBR3-209ENST00000477461 PLA2G1BP04054 148 aaKnown RBP6.8□□□□□ -1.32
UBR3-209ENST00000477461 NLGN1Q8N2Q7 840 aa6.8□□□□□ -1.32
UBR3-209ENST00000477461 OR6P1Q8NGX9 317 aa6.8□□□□□ -1.32
UBR3-209ENST00000477461 PPP1R14AQ96A00 147 aa6.8□□□□□ -1.32
UBR3-209ENST00000477461 LGR4Q9BXB1 951 aa6.8□□□□□ -1.32
UBR3-209ENST00000477461 KIAA1522Q9P206 1035 aaPredicted RBP6.8□□□□□ -1.32
UBR3-209ENST00000477461 CCDC9Q9Y3X0 531 aaKnown RBP6.8□□□□□ -1.32
UBR3-209ENST00000477461 NPHP3-ACAD11A0A0J9YXS1 232 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 UNCXA6NJT0 531 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 ASGR2P07307 311 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 GLI4P10075 376 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 SYN1P17600 705 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 FBLN1P23142 703 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 GJA8P48165 433 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 CORO7P57737 925 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 SP8Q8IXZ3 490 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 C19orf47Q8N9M1 422 aaKnown RBP6.79□□□□□ -1.32
UBR3-209ENST00000477461 FNIP1Q8TF40 1166 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 RTEL1Q9NZ71 1219 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 CLEC1BQ9P126 229 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 INPP5FQ9Y2H2 1132 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 SIT1Q9Y3P8 196 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 PMF1-BGLAPU3KQ54 211 aa6.79□□□□□ -1.32
UBR3-209ENST00000477461 FUCA1P04066 466 aa6.78□□□□□ -1.32
UBR3-209ENST00000477461 NCAM1P13591 858 aa6.78□□□□□ -1.32
UBR3-209ENST00000477461 PAMP19021 973 aa6.78□□□□□ -1.32
UBR3-209ENST00000477461 PMLP29590 882 aa6.78□□□□□ -1.32
UBR3-209ENST00000477461 SLURP1P55000 103 aa6.78□□□□□ -1.32
UBR3-209ENST00000477461 CABP7Q86V35 215 aa6.78□□□□□ -1.32
UBR3-209ENST00000477461 ZNF526Q8TF50 670 aaPredicted RBP6.78□□□□□ -1.32
UBR3-209ENST00000477461 BTG4Q9NY30 223 aa6.78□□□□□ -1.32
UBR3-209ENST00000477461 C7orf72A4D263 438 aa6.77□□□□□ -1.33
UBR3-209ENST00000477461 ANKRD34BA5PLL1 514 aa6.77□□□□□ -1.33
UBR3-209ENST00000477461 KCNC1P48547 511 aa6.77□□□□□ -1.33
UBR3-209ENST00000477461 RCC1LQ96I51 464 aaKnown RBP6.77□□□□□ -1.33
UBR3-209ENST00000477461 APBA2Q99767 749 aa6.77□□□□□ -1.33
UBR3-209ENST00000477461 SPATA25Q9BR10 227 aa6.77□□□□□ -1.33
UBR3-209ENST00000477461 MTA3Q9BTC8 594 aa6.77□□□□□ -1.33
UBR3-209ENST00000477461 LUC7LQ9NQ29 371 aaKnown RBP6.77□□□□□ -1.33
UBR3-209ENST00000477461 MRVI1Q9Y6F6 885 aa6.77□□□□□ -1.33
UBR3-209ENST00000477461 NPHS1O60500 1241 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 NTRK1P04629 796 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 PLS3P13797 630 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 CASP7P55210 303 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 SCRN1Q12765 414 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 SKOR2Q2VWA4 1001 aaPredicted RBP6.76□□□□□ -1.33
UBR3-209ENST00000477461 VWA3BQ502W6 1294 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 MBLAC2Q68D91 279 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 ZNF513Q8N8E2 541 aaPredicted RBP6.76□□□□□ -1.33
UBR3-209ENST00000477461 SEC16BQ96JE7 1060 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 NOX5Q96PH1 765 aa6.76□□□□□ -1.33
UBR3-209ENST00000477461 GRB10Q13322 594 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 BVESQ8NE79 360 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 SMARCC2Q8TAQ2 1214 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 CXorf38Q8TB03 319 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 KRTAP4-11Q9BYQ6 195 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 MARCH2Q9P0N8 246 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 EMC9Q9Y3B6 208 aa6.75□□□□□ -1.33
UBR3-209ENST00000477461 NOP56O00567 594 aaKnown RBP6.74□□□□□ -1.33
UBR3-209ENST00000477461 PRICKLE3O43900 615 aaPredicted RBP6.74□□□□□ -1.33
UBR3-209ENST00000477461 CELA3BP08861 270 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 NT5DC1Q5TFE4 455 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms