RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CLUAP1Q96AJ1 413 aa18.43■□□□□ 0.54
SMG5-204ENST00000476954 ACAD9Q9H845 621 aa18.43■□□□□ 0.54
SMG5-204ENST00000476954 RNF146Q9NTX7 359 aa18.43■□□□□ 0.54
SMG5-204ENST00000476954 POLR3EQ9NVU0 708 aa18.43■□□□□ 0.54
SMG5-204ENST00000476954 COG6Q9Y2V7 657 aa18.43■□□□□ 0.54
SMG5-204ENST00000476954 NOP58Q9Y2X3 529 aaKnown RBP18.43■□□□□ 0.54
SMG5-204ENST00000476954 KMT2EQ8IZD2 1858 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 GOLIM4O00461 696 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 GFRA3O60609 400 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 GJB5O95377 273 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 TRIM27P14373 513 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 AACSQ86V21 672 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 RAD9AQ99638 391 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 MTG1Q9BT17 334 aaPredicted RBP18.42■□□□□ 0.54
SMG5-204ENST00000476954 ATP8A2Q9NTI2 1148 aa18.42■□□□□ 0.54
SMG5-204ENST00000476954 OAZ1P54368 228 aa18.41■□□□□ 0.54
SMG5-204ENST00000476954 PTPN5P54829 565 aa18.41■□□□□ 0.54
SMG5-204ENST00000476954 DUSP28Q4G0W2 176 aa18.41■□□□□ 0.54
SMG5-204ENST00000476954 ADHFE1Q8IWW8 467 aa18.41■□□□□ 0.54
SMG5-204ENST00000476954 FBXO22Q8NEZ5 403 aa18.41■□□□□ 0.54
SMG5-204ENST00000476954 NYAP2Q9P242 653 aa18.41■□□□□ 0.54
SMG5-204ENST00000476954 ATG2AQ2TAZ0 1938 aa18.41■□□□□ 0.54
SMG5-204ENST00000476954 BFSP2Q13515 415 aa18.4■□□□□ 0.54
SMG5-204ENST00000476954 TTF1Q15361 905 aaPredicted RBP18.4■□□□□ 0.54
SMG5-204ENST00000476954 CTR9Q6PD62 1173 aa18.4■□□□□ 0.54
SMG5-204ENST00000476954 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
SMG5-204ENST00000476954 CTAGE1Q96RT6 745 aa18.4■□□□□ 0.54
SMG5-204ENST00000476954 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
SMG5-204ENST00000476954 CLIP2Q9UDT6 1046 aa18.4■□□□□ 0.54
SMG5-204ENST00000476954 PRKAG3Q9UGI9 489 aa18.4■□□□□ 0.54
SMG5-204ENST00000476954 FEM1BQ9UK73 627 aa18.4■□□□□ 0.54
SMG5-204ENST00000476954 RIF1Q5UIP0 2472 aaKnown RBP18.4■□□□□ 0.54
SMG5-204ENST00000476954 ANP32CO43423 234 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 RASA1P20936 1047 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 SNAP25P60880 206 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 FOXK2Q01167 660 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 MUM1L1Q5H9M0 696 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 LRRC47Q8N1G4 583 aaKnown RBP18.39■□□□□ 0.53
SMG5-204ENST00000476954 MRPL38Q96DV4 380 aaKnown RBP18.39■□□□□ 0.53
SMG5-204ENST00000476954 VTA1Q9NP79 307 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 C5orf42Q9H799 3197 aa18.39■□□□□ 0.53
SMG5-204ENST00000476954 PLXNA3P51805 1871 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 NBNO60934 754 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 CT47B1P0C2W7 299 aaPredicted RBP18.38■□□□□ 0.53
SMG5-204ENST00000476954 ALAS1P13196 640 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 CLUL1Q15846 466 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 HERC4Q5GLZ8 1057 aaPredicted RBP18.38■□□□□ 0.53
SMG5-204ENST00000476954 RNF135Q8IUD6 432 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 AMOTL1Q8IY63 956 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 OR6J1Q8NGC5 347 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
SMG5-204ENST00000476954 TRERF1Q96PN7 1200 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 CRBNQ96SW2 442 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 WDR11Q9BZH6 1224 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 ALG13Q9NP73 1137 aaKnown RBP18.38■□□□□ 0.53
SMG5-204ENST00000476954 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
SMG5-204ENST00000476954 NOD1Q9Y239 953 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
SMG5-204ENST00000476954 CPT1AP50416 773 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 NFRKBQ6P4R8 1299 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 BANK1Q8NDB2 785 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 DHX38Q92620 1227 aaKnown RBP18.37■□□□□ 0.53
SMG5-204ENST00000476954 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
SMG5-204ENST00000476954 IL1RAPL2Q9NP60 686 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 CYP39A1Q9NYL5 469 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 SLC4A4Q9Y6R1 1079 aa18.37■□□□□ 0.53
SMG5-204ENST00000476954 IGKV6D-41A0A0C4DH26 115 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 ADD2P35612 726 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 LTBRP36941 435 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 COL19A1Q14993 1142 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 PTGISQ16647 500 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
SMG5-204ENST00000476954 LRRC8DQ7L1W4 858 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 MICAL3Q7RTP6 2002 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 NLRC5Q86WI3 1866 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 MORC4Q8TE76 937 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 FRAT1Q92837 279 aaPredicted RBP18.36■□□□□ 0.53
SMG5-204ENST00000476954 EDAQ92838 391 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 COPS5Q92905 334 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 PBXIP1Q96AQ6 731 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 CLDND1Q9NY35 253 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 FAM50BQ9Y247 325 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 EXOC6BQ9Y2D4 811 aa18.36■□□□□ 0.53
SMG5-204ENST00000476954 MYH7P12883 1935 aa18.35■□□□□ 0.53
SMG5-204ENST00000476954 TMEM221A6NGB7 291 aa18.35■□□□□ 0.53
SMG5-204ENST00000476954 M0R296 226 aa18.35■□□□□ 0.53
SMG5-204ENST00000476954 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
SMG5-204ENST00000476954 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMG5-204ENST00000476954 AFAP1L1Q8TED9 768 aa18.35■□□□□ 0.53
SMG5-204ENST00000476954 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
SMG5-204ENST00000476954 FAM186AA6NE01 2351 aa18.35■□□□□ 0.53
SMG5-204ENST00000476954 CXCL10P02778 98 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 BMP3P12645 472 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 SELPP16109 830 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 PTPN11Q06124 597 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms