RNA–Protein interactions for RNA: ENST00000476908.1

TRIM33-204, Transcript of tripartite motif containing 33, humanhuman

TSL 2

Gene TRIM33, Length 1,461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33-204ENST00000476908 MCMDC2Q4G0Z9 681 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 PCSK9Q8NBP7 692 aaKnown RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 VTI1AQ96AJ9 217 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 SPC25Q9HBM1 224 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 PDGFCQ9NRA1 345 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 TOMM22Q9NS69 142 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 CYP39A1Q9NYL5 469 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 CCPG1Q9ULG6 757 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 FRMPD2Q68DX3 1309 aaPredicted RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 ARVCFO00192 962 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 TIMP1P01033 207 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 NKX3-2P78367 333 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 TMEM63BQ5T3F8 832 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 NSMFQ6X4W1 530 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 NOL8Q76FK4 1167 aaKnown RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 EEPD1Q7L9B9 569 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 FBXO16Q8IX29 292 aaPredicted RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 DCAF4Q8WV16 495 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
TRIM33-204ENST00000476908 GNEQ9Y223 722 aaKnown RBP11.25□□□□□ -0.61
TRIM33-204ENST00000476908 MROH7Q68CQ1 1323 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 CCDC171Q6TFL3 1326 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 ASB14A6NK59 587 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 ICAM1P05362 532 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 TOP1P11387 765 aaKnown RBP11.24□□□□□ -0.61
TRIM33-204ENST00000476908 SMPD1P17405 629 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 MFSD5Q6N075 450 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 TAPT1Q6NXT6 567 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 CXCL17Q6UXB2 119 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 BTNL9Q6UXG8 535 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 TLK2Q86UE8 772 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 TBC1D10CQ8IV04 446 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 FAM126BQ8IXS8 530 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 MYLIPQ8WY64 445 aa11.24□□□□□ -0.61
TRIM33-204ENST00000476908 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.613e-6■□□□□ 9.9
TRIM33-204ENST00000476908 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.24□□□□□ -0.61
TRIM33-204ENST00000476908 ZMYM6O95789 1325 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 NFIBO00712 420 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 BAATQ14032 418 aaPredicted RBP11.23□□□□□ -0.61
TRIM33-204ENST00000476908 C16orf59Q7L2K0 433 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM33-204ENST00000476908 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 TCP11L1Q9NUJ3 509 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
TRIM33-204ENST00000476908 SCN10AQ9Y5Y9 1956 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 GRIN2DO15399 1336 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 DYNC1LI2O43237 492 aaPredicted RBP11.22□□□□□ -0.61
TRIM33-204ENST00000476908 CD4P01730 458 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 PDHBP11177 359 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 CSF2RAP15509 400 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 FSCN1Q16658 493 aaKnown RBP11.22□□□□□ -0.61
TRIM33-204ENST00000476908 SLC30A10Q6XR72 485 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 SMC5Q8IY18 1101 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 SLC43A3Q8NBI5 491 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 AP5M1Q9H0R1 490 aa11.22□□□□□ -0.61
TRIM33-204ENST00000476908 NEDD4P46934 1319 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 UMODL1Q5DID0 1318 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 GRXCR1A8MXD5 290 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 TLR3O15455 904 aaKnown RBP11.21□□□□□ -0.61
TRIM33-204ENST00000476908 MAP3K13O43283 966 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 IGHDP01880 384 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 ACRP10323 421 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 SDSP20132 328 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 DNAJB2P25686 324 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 CYP2C18P33260 490 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 ALDH5A1P51649 535 aaPredicted RBP11.21□□□□□ -0.61
TRIM33-204ENST00000476908 PSMC6P62333 389 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 ZNF543Q08ER8 600 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 PPIGQ13427 754 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRIM33-204ENST00000476908 ITGA7Q13683 1181 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 TMEM240Q5SV17 173 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 IQSEC1Q6DN90 963 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 KIAA1211Q6ZU35 1233 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 TICAM2Q86XR7 235 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 PLEKHM2Q8IWE5 1019 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 MAFAQ8NHW3 353 aaPredicted RBP11.21□□□□□ -0.61
TRIM33-204ENST00000476908 CLEC4DQ8WXI8 215 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 TRIP12Q14669 1992 aaPredicted RBP11.21□□□□□ -0.61
TRIM33-204ENST00000476908 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.61
TRIM33-204ENST00000476908 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.2□□□□□ -0.62
TRIM33-204ENST00000476908 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.2□□□□□ -0.62
TRIM33-204ENST00000476908 PTPDC1A2A3K4 754 aa11.2□□□□□ -0.62
TRIM33-204ENST00000476908 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
TRIM33-204ENST00000476908 FOSL2P15408 326 aa11.2□□□□□ -0.62
TRIM33-204ENST00000476908 RASIP1Q5U651 963 aa11.2□□□□□ -0.62
TRIM33-204ENST00000476908 MFSD6Q6ZSS7 791 aa11.2□□□□□ -0.62
TRIM33-204ENST00000476908 ZNF365Q70YC5 407 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms