RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 ABCB11O95342 1321 aa24.92■■□□□ 1.58
LIMK1-204ENST00000476792 TRIM43BA6NCK2 446 aa24.92■■□□□ 1.58
LIMK1-204ENST00000476792 KLRF2D3W0D1 207 aa24.92■■□□□ 1.58
LIMK1-204ENST00000476792 WTAPQ15007 396 aa24.92■■□□□ 1.58
LIMK1-204ENST00000476792 IQSEC1Q6DN90 963 aa24.92■■□□□ 1.58
LIMK1-204ENST00000476792 MORC4Q8TE76 937 aa24.92■■□□□ 1.58
LIMK1-204ENST00000476792 TBC1D5Q92609 795 aa24.92■■□□□ 1.58
LIMK1-204ENST00000476792 TRIM43Q96BQ3 446 aaPredicted RBP24.92■■□□□ 1.58
LIMK1-204ENST00000476792 GNEQ9Y223 722 aaKnown RBP24.92■■□□□ 1.58
LIMK1-204ENST00000476792 CTAGE5O15320 804 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 CLTBP09497 229 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 PDE4DQ08499 809 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 SART3Q15020 963 aaKnown RBP24.91■■□□□ 1.58
LIMK1-204ENST00000476792 TMEM67Q5HYA8 995 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 FBXO11Q86XK2 927 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 BADQ92934 168 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 LSG1Q9H089 658 aaKnown RBP24.91■■□□□ 1.58
LIMK1-204ENST00000476792 MAD2L2Q9UI95 211 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 LRRC37A2A6NM11 1700 aa24.91■■□□□ 1.58
LIMK1-204ENST00000476792 ANO2Q9NQ90 1003 aa24.9■■□□□ 1.58
LIMK1-204ENST00000476792 MYH6P13533 1939 aa24.89■■□□□ 1.58
LIMK1-204ENST00000476792 ANTXR2P58335 489 aa24.89■■□□□ 1.58
LIMK1-204ENST00000476792 GRM4Q14833 912 aa24.89■■□□□ 1.58
LIMK1-204ENST00000476792 FSCN1Q16658 493 aaKnown RBP24.89■■□□□ 1.58
LIMK1-204ENST00000476792 CXCL17Q6UXB2 119 aa24.89■■□□□ 1.58
LIMK1-204ENST00000476792 MB21D2Q8IYB1 491 aaPredicted RBP24.89■■□□□ 1.58
LIMK1-204ENST00000476792 MPHOSPH6Q99547 160 aaKnown RBP24.89■■□□□ 1.58
LIMK1-204ENST00000476792 WDR11Q9BZH6 1224 aa24.89■■□□□ 1.58
LIMK1-204ENST00000476792 TMEM39AQ9NV64 488 aa24.89■■□□□ 1.58
LIMK1-204ENST00000476792 ELP1O95163 1332 aa24.88■■□□□ 1.57
LIMK1-204ENST00000476792 PALM3A6NDB9 673 aaPredicted RBP24.88■■□□□ 1.57
LIMK1-204ENST00000476792 DCDC2CA8MYV0 355 aa24.88■■□□□ 1.57
LIMK1-204ENST00000476792 BMP2KLQ5H9B9 411 aa24.88■■□□□ 1.57
LIMK1-204ENST00000476792 HOMER1Q86YM7 354 aa24.88■■□□□ 1.57
LIMK1-204ENST00000476792 MCF2L2Q86YR7 1114 aa24.88■■□□□ 1.57
LIMK1-204ENST00000476792 RGS22Q8NE09 1264 aa24.88■■□□□ 1.57
LIMK1-204ENST00000476792 MRPL11Q9Y3B7 192 aaKnown RBP24.88■■□□□ 1.57
LIMK1-204ENST00000476792 RANBP2P49792 3224 aaKnown RBP24.88■■□□□ 1.57
LIMK1-204ENST00000476792 LOC102724159A0A0B4J2E5 919 aa24.87■■□□□ 1.57
LIMK1-204ENST00000476792 A0A0U1RQG5 324 aaPredicted RBP24.87■■□□□ 1.57
LIMK1-204ENST00000476792 PWP2Q15269 919 aaKnown RBP24.87■■□□□ 1.57
LIMK1-204ENST00000476792 CATIPQ7Z7H3 387 aa24.87■■□□□ 1.57
LIMK1-204ENST00000476792 DNERQ8NFT8 737 aa24.87■■□□□ 1.57
LIMK1-204ENST00000476792 SYTL5Q8TDW5 730 aaPredicted RBP24.87■■□□□ 1.57
LIMK1-204ENST00000476792 CCDC136Q96JN2 1154 aa24.87■■□□□ 1.57
LIMK1-204ENST00000476792 TAAR1Q96RJ0 339 aa24.87■■□□□ 1.57
LIMK1-204ENST00000476792 AMNQ9BXJ7 453 aa24.87■■□□□ 1.57
LIMK1-204ENST00000476792 GPHNQ9NQX3 736 aaPredicted RBP24.87■■□□□ 1.57
LIMK1-204ENST00000476792 LTBP2Q14767 1821 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 BAZ2BQ9UIF8 2168 aaKnown RBP24.86■■□□□ 1.57
LIMK1-204ENST00000476792 B4DLN1 442 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 SLC27A2O14975 620 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 ZEB2O60315 1214 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 RAG1P15918 1043 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 ITGB8P26012 769 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 MRPL12P52815 198 aaKnown RBP24.86■■□□□ 1.57
LIMK1-204ENST00000476792 NKX3-2P78367 333 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 FAAP100Q0VG06 881 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 DUSP28Q4G0W2 176 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 ANKRD33Q7Z3H0 272 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 IGDCC4Q8TDY8 1250 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 COL20A1Q9P218 1284 aa24.86■■□□□ 1.57
LIMK1-204ENST00000476792 ARVCFO00192 962 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 ZBTB5O15062 677 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 PRC1O43663 620 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 PPP1R11O60927 126 aaPredicted RBP24.85■■□□□ 1.57
LIMK1-204ENST00000476792 CFBP00751 764 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 SLC35G1Q2M3R5 365 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 LRIT3Q3SXY7 679 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 CASC1Q6TDU7 716 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 PIBF1Q8WXW3 757 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 TOX2Q96NM4 488 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 PIGSQ96S52 555 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 Q9Y3F1 56 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 PCDHA1Q9Y5I3 950 aa24.85■■□□□ 1.57
LIMK1-204ENST00000476792 KIAA0355O15063 1070 aa24.84■■□□□ 1.57
LIMK1-204ENST00000476792 EDNRBP24530 442 aa24.84■■□□□ 1.57
LIMK1-204ENST00000476792 CDK7P50613 346 aa24.84■■□□□ 1.57
LIMK1-204ENST00000476792 TROAPQ12815 778 aa24.84■■□□□ 1.57
LIMK1-204ENST00000476792 CREB3L3Q68CJ9 461 aa24.84■■□□□ 1.57
LIMK1-204ENST00000476792 MYL10Q9BUA6 226 aa24.84■■□□□ 1.57
LIMK1-204ENST00000476792 DNAH12Q6ZR08 3092 aa24.84■■□□□ 1.57
LIMK1-204ENST00000476792 RBM47A0AV96 593 aaKnown RBP24.83■■□□□ 1.57
LIMK1-204ENST00000476792 COL9A3Q14050 684 aaPredicted RBP24.83■■□□□ 1.57
LIMK1-204ENST00000476792 PPP2R5BQ15173 497 aa24.83■■□□□ 1.57
LIMK1-204ENST00000476792 NFXL1Q6ZNB6 911 aa24.83■■□□□ 1.57
LIMK1-204ENST00000476792 OR6J1Q8NGC5 347 aa24.83■■□□□ 1.57
LIMK1-204ENST00000476792 NSUN6Q8TEA1 469 aaKnown RBP24.83■■□□□ 1.57
LIMK1-204ENST00000476792 MTMR8Q96EF0 704 aa24.83■■□□□ 1.57
LIMK1-204ENST00000476792 RMDN3Q96TC7 470 aa24.83■■□□□ 1.57
LIMK1-204ENST00000476792 MROH7Q68CQ1 1323 aa24.83■■□□□ 1.56
LIMK1-204ENST00000476792 EIF2AK2P19525 551 aaKnown RBP24.82■■□□□ 1.56
LIMK1-204ENST00000476792 MCM5P33992 734 aa24.82■■□□□ 1.56
LIMK1-204ENST00000476792 PSMC6P62333 389 aa24.82■■□□□ 1.56
LIMK1-204ENST00000476792 NECTIN1Q15223 517 aa24.82■■□□□ 1.56
LIMK1-204ENST00000476792 SHHQ15465 462 aa24.82■■□□□ 1.56
LIMK1-204ENST00000476792 C9orf50Q5SZB4 431 aa24.82■■□□□ 1.56
LIMK1-204ENST00000476792 ARHGEF16Q5VV41 709 aa24.82■■□□□ 1.56
LIMK1-204ENST00000476792 SEPT14Q6ZU15 432 aa24.82■■□□□ 1.56
LIMK1-204ENST00000476792 SCFD2Q8WU76 684 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms