RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SNW1Q13573 536 aaKnown RBP32.81■■■□□ 2.84
VEGFA-211ENST00000476772 RESP18Q5W5W9 173 aa32.81■■■□□ 2.84
VEGFA-211ENST00000476772 REPS2Q8NFH8 660 aa32.81■■■□□ 2.84
VEGFA-211ENST00000476772 FERMT2Q96AC1 680 aa32.81■■■□□ 2.84
VEGFA-211ENST00000476772 DDX19AQ9NUU7 478 aaKnown RBP32.81■■■□□ 2.84
VEGFA-211ENST00000476772 MYPNQ86TC9 1320 aa32.8■■■□□ 2.84
VEGFA-211ENST00000476772 ALAS1P13196 640 aa32.8■■■□□ 2.84
VEGFA-211ENST00000476772 PFKFB1P16118 471 aa32.8■■■□□ 2.84
VEGFA-211ENST00000476772 TMEM60Q9H2L4 133 aa32.8■■■□□ 2.84
VEGFA-211ENST00000476772 SPDYE16A6NNV3 312 aaPredicted RBP32.79■■■□□ 2.84
VEGFA-211ENST00000476772 SPECC1Q5M775 1068 aa32.79■■■□□ 2.84
VEGFA-211ENST00000476772 CHADLQ6NUI6 762 aa32.79■■■□□ 2.84
VEGFA-211ENST00000476772 TEX2Q8IWB9 1127 aa32.79■■■□□ 2.84
VEGFA-211ENST00000476772 ZNF579Q8NAF0 562 aaKnown RBP32.79■■■□□ 2.84
VEGFA-211ENST00000476772 CSRNP2Q9H175 543 aa32.79■■■□□ 2.84
VEGFA-211ENST00000476772 SPDYE3A6NKU9 549 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 GCOM1H8Y6P7 765 aaPredicted RBP32.78■■■□□ 2.84
VEGFA-211ENST00000476772 FOSP01100 380 aaPredicted RBP32.78■■■□□ 2.84
VEGFA-211ENST00000476772 POLR2MP0CAP2 368 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 FMR1NBQ8N0W7 255 aaPredicted RBP32.78■■■□□ 2.84
VEGFA-211ENST00000476772 C2orf69Q8N8R5 385 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 CLEC4DQ8WXI8 215 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 HOXC10Q9NYD6 342 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 NEMFO60524 1076 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 TDP2O95551 362 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 ORC2Q13416 577 aaPredicted RBP32.78■■■□□ 2.84
VEGFA-211ENST00000476772 GSE1Q14687 1217 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 ARL6IP4Q66PJ3 421 aaKnown RBP32.78■■■□□ 2.84
VEGFA-211ENST00000476772 NUP62CLQ9H1M0 184 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 PNMA2Q9UL42 364 aa32.78■■■□□ 2.84
VEGFA-211ENST00000476772 SYCE3A1L190 88 aa32.77■■■□□ 2.84
VEGFA-211ENST00000476772 VWA3AA6NCI4 1184 aa32.77■■■□□ 2.84
VEGFA-211ENST00000476772 ITGBL1O95965 494 aaPredicted RBP32.77■■■□□ 2.84
VEGFA-211ENST00000476772 HOMER2Q9NSB8 354 aa32.77■■■□□ 2.84
VEGFA-211ENST00000476772 HPSEQ9Y251 543 aa32.77■■■□□ 2.84
VEGFA-211ENST00000476772 FAM237AA0A1B0GTK4 181 aa32.76■■■□□ 2.84
VEGFA-211ENST00000476772 NFIBO00712 420 aa32.76■■■□□ 2.84
VEGFA-211ENST00000476772 HOXA7P31268 230 aaPredicted RBP32.76■■■□□ 2.84
VEGFA-211ENST00000476772 MOGSQ13724 837 aa32.76■■■□□ 2.84
VEGFA-211ENST00000476772 IL17AQ16552 155 aa32.76■■■□□ 2.84
VEGFA-211ENST00000476772 FCHSD1Q86WN1 690 aa32.76■■■□□ 2.84
VEGFA-211ENST00000476772 CLSTN2Q9H4D0 955 aa32.76■■■□□ 2.84
VEGFA-211ENST00000476772 RBBP6Q7Z6E9 1792 aaKnown RBP32.76■■■□□ 2.83
VEGFA-211ENST00000476772 LAD1O00515 517 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 OAZ1P54368 228 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 TMEM132BQ14DG7 1078 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 MUM1L1Q5H9M0 696 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 POTEDQ86YR6 584 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 ZNF214Q9UL59 606 aaPredicted RBP32.75■■■□□ 2.83
VEGFA-211ENST00000476772 AGTPBP1Q9UPW5 1226 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 ZNF445P59923 1031 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 CAMK4Q16566 473 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 PPP4R3AQ6IN85 833 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 CRYGNQ8WXF5 182 aa32.75■■■□□ 2.83
VEGFA-211ENST00000476772 A0A0G2JMZ2 1700 aa32.74■■■□□ 2.83
VEGFA-211ENST00000476772 SLC37A4O43826 429 aa32.74■■■□□ 2.83
VEGFA-211ENST00000476772 KINO60870 393 aaKnown RBP32.74■■■□□ 2.83
VEGFA-211ENST00000476772 SREBF1P36956 1147 aa32.74■■■□□ 2.83
VEGFA-211ENST00000476772 TRPM7Q96QT4 1865 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 OR52Z1P0C646 297 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 HSD17B4P51659 736 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 USP11P51784 963 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 ARHGAP4P98171 946 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 SNAPC2Q13487 334 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 CST9Q5W186 159 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 SNRNP48Q6IEG0 339 aaKnown RBP32.73■■■□□ 2.83
VEGFA-211ENST00000476772 FASTKD5Q7L8L6 764 aaKnown RBP32.73■■■□□ 2.83
VEGFA-211ENST00000476772 MCF2L2Q86YR7 1114 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 TRERF1Q96PN7 1200 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 FAM13BQ9NYF5 915 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 RIPK3Q9Y572 518 aa32.73■■■□□ 2.83
VEGFA-211ENST00000476772 ATP2A1O14983 1001 aa32.72■■■□□ 2.83
VEGFA-211ENST00000476772 PRPHP41219 470 aa32.72■■■□□ 2.83
VEGFA-211ENST00000476772 SYKP43405 635 aa32.72■■■□□ 2.83
VEGFA-211ENST00000476772 USP49Q70CQ1 688 aa32.72■■■□□ 2.83
VEGFA-211ENST00000476772 TNMDQ9H2S6 317 aa32.72■■■□□ 2.83
VEGFA-211ENST00000476772 ZNF202O95125 648 aa32.72■■■□□ 2.83
VEGFA-211ENST00000476772 GCFC2P16383 781 aaKnown RBP32.72■■■□□ 2.83
VEGFA-211ENST00000476772 IRX3P78415 501 aaPredicted RBP32.72■■■□□ 2.83
VEGFA-211ENST00000476772 DTHD1Q6ZMT9 781 aa32.72■■■□□ 2.83
VEGFA-211ENST00000476772 NAP1L4Q99733 375 aaKnown RBP32.72■■■□□ 2.83
VEGFA-211ENST00000476772 DDX25Q9UHL0 483 aaKnown RBP32.72■■■□□ 2.83
VEGFA-211ENST00000476772 LETM1O95202 739 aaPredicted RBP32.71■■■□□ 2.83
VEGFA-211ENST00000476772 GHRHRQ02643 423 aa32.71■■■□□ 2.83
VEGFA-211ENST00000476772 RNF146Q9NTX7 359 aa32.71■■■□□ 2.83
VEGFA-211ENST00000476772 KCNH3Q9ULD8 1083 aa32.71■■■□□ 2.83
VEGFA-211ENST00000476772 GPAT2Q6NUI2 795 aa32.7■■■□□ 2.83
VEGFA-211ENST00000476772 POTEEQ6S8J3 1075 aa32.7■■■□□ 2.83
VEGFA-211ENST00000476772 SYMPKQ92797 1274 aaKnown RBP32.7■■■□□ 2.83
VEGFA-211ENST00000476772 EPSTI1Q96J88 318 aa32.7■■■□□ 2.83
VEGFA-211ENST00000476772 TEX13BQ9BXU2 312 aa32.7■■■□□ 2.83
VEGFA-211ENST00000476772 ASCC2Q9H1I8 757 aaPredicted RBP32.7■■■□□ 2.83
VEGFA-211ENST00000476772 CALCRLQ16602 461 aa32.69■■■□□ 2.82
VEGFA-211ENST00000476772 LBX2Q6XYB7 198 aa32.69■■■□□ 2.82
VEGFA-211ENST00000476772 MTMR9Q96QG7 549 aa32.69■■■□□ 2.82
VEGFA-211ENST00000476772 CYP3A7-CYP3A51PA0A087WV96 503 aa32.69■■■□□ 2.82
VEGFA-211ENST00000476772 CYP3A7P24462 503 aa32.69■■■□□ 2.82
VEGFA-211ENST00000476772 LONP1P36776 959 aaKnown RBP32.69■■■□□ 2.82
VEGFA-211ENST00000476772 PLS1Q14651 629 aa32.69■■■□□ 2.82
VEGFA-211ENST00000476772 MOXD1Q6UVY6 613 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms