RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 KSR1Q8IVT5 923 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 CHPFQ8IZ52 775 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 AFAP1L2Q8N4X5 818 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 KREMEN2Q8NCW0 462 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 NPLOC4Q8TAT6 608 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 COPS5Q92905 334 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 TP53INP1Q96A56 240 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 TCTN2Q96GX1 697 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 SCLYQ96I15 445 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 MFSD14AQ96MC6 490 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 UBA5Q9GZZ9 404 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 TRIT1Q9H3H1 467 aaKnown RBP5.43□□□□□ -1.54
VPS13D-207ENST00000476169 AASDHPPTQ9NRN7 309 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 ASXL2Q76L83 1435 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 TCRBV16S1A1N1A0A5B0 115 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 C1QTNF9BB2RNN3 333 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 B4E1Z4 1266 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 CRTAMO95727 393 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 LDHAP00338 332 aaKnown RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 JMJD7P0C870 316 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 IFNGR1P15260 489 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 POU3F2P20265 443 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 PAX3P23760 479 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 BMP8BP34820 402 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 SEPHS1P49903 392 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 RAB27AP51159 221 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 NEK2P51955 445 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 IRX6P78412 446 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 GUCY1A3Q02108 690 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 STRN3Q13033 797 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 ACBD5Q5T8D3 534 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 CDKAL1Q5VV42 579 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 DUSP27Q5VZP5 1158 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 PKN3Q6P5Z2 889 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 UBE2R2Q712K3 238 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 MTDHQ86UE4 582 aaKnown RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 CD163Q86VB7 1156 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 SHISA5Q8N114 240 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 FRS2Q8WU20 508 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 FCRL3Q96P31 734 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 PHF20Q9BVI0 1012 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 DUSP15Q9H1R2 295 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-207ENST00000476169 GPRC5CQ9NQ84 441 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 ZIM2Q9NZV7 527 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 PCDHA9Q9Y5H5 950 aa5.42□□□□□ -1.54
VPS13D-207ENST00000476169 SSU72P8A0A1W2PR75 194 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 FAM83GA6ND36 823 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 NPTXRO95502 500 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 SYPP08247 313 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 SRFP11831 508 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 VAV1P15498 845 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 NAT1P18440 290 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 PCBP3P57721 371 aaKnown RBP5.41□□□□□ -1.54
VPS13D-207ENST00000476169 GPR85P60893 370 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 MCL1Q07820 350 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 PCBP1Q15365 356 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS13D-207ENST00000476169 CFAP100Q494V2 611 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 C4orf46Q504U0 113 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 RNF43Q68DV7 783 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 RSPO2Q6UXX9 243 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-207ENST00000476169 STRA8Q7Z7C7 330 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 ZBTB46Q86UZ6 589 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 FAM181AQ8N9Y4 354 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 EVI5LQ96CN4 794 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 ZFYVE21Q9BQ24 234 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 SLC12A9Q9BXP2 914 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 ASPSCR1Q9BZE9 553 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 CLEC1BQ9P126 229 aa5.41□□□□□ -1.54
VPS13D-207ENST00000476169 NOB1Q9ULX3 412 aaKnown RBP5.41□□□□□ -1.54
VPS13D-207ENST00000476169 RNF225M0QZC1 329 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-207ENST00000476169 ZNF205O95201 554 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 F13BP05160 661 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 GSTM1P09488 218 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 PLS3P13797 630 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 LTBRP36941 435 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 GATA4P43694 442 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 OXCT1P55809 520 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 KCNAB2Q13303 367 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 DHCR24Q15392 516 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 SEPT7Q16181 437 aaKnown RBP5.4□□□□□ -1.54
VPS13D-207ENST00000476169 HSP90AB4PQ58FF6 505 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 EEF1DP3Q658K8 133 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 E4F1Q66K89 784 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-207ENST00000476169 CDCA2Q69YH5 1023 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-207ENST00000476169 RCSD1Q6JBY9 416 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 PRR23CQ6ZRP0 262 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 TSPYL5Q86VY4 417 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-207ENST00000476169 IFNL3Q8IZI9 196 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 WDR66Q8TBY9 1149 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 DIO2Q92813 273 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 MTFR1LQ9H019 292 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 ARNT2Q9HBZ2 717 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 GPR27Q9NS67 375 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 ATG3Q9NT62 314 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 SLC5A4Q9NY91 659 aa5.4□□□□□ -1.54
VPS13D-207ENST00000476169 BCCIPQ9P287 314 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS13D-207ENST00000476169 TMEFF2Q9UIK5 374 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-207ENST00000476169 FAM181BA6NEQ2 426 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 H3BS24 57 aa5.39□□□□□ -1.55
VPS13D-207ENST00000476169 AKAP10O43572 662 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms