RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 RBM5P52756 815 aaKnown RBP eCLIP17.93■□□□□ 0.46
VARS2-207ENST00000476162 CALCRLQ16602 461 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 CCDC93Q567U6 631 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 STRIP1Q5VSL9 837 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 IRF2BP1Q8IU81 584 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 ANKRD20A12PQ8NF67 263 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 ERO1AQ96HE7 468 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 DESI2Q9BSY9 194 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 TRIM9Q9C026 710 aa17.93■□□□□ 0.46
VARS2-207ENST00000476162 USP17L10C9JJH3 530 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 H0YIN7 160 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 MFAP3LO75121 409 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 FXR1P51114 621 aaKnown RBP eCLIP17.92■□□□□ 0.46
VARS2-207ENST00000476162 UBE2SQ16763 222 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 DACT2Q5SW24 774 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 GPATCH4Q5T3I0 446 aaKnown RBP17.92■□□□□ 0.46
VARS2-207ENST00000476162 CCDC17Q96LX7 622 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 RIC8AQ9NPQ8 531 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 ITIH6Q6UXX5 1313 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 DDTLA6NHG4 134 aaPredicted RBP17.92■□□□□ 0.46
VARS2-207ENST00000476162 ECE2O60344 883 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 STIM1Q13586 685 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
VARS2-207ENST00000476162 EFCC1Q9HA90 598 aa17.92■□□□□ 0.46
VARS2-207ENST00000476162 PSMA7O14818 248 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 TNNI2P48788 182 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 SEMA3FQ13275 785 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 PPP1R18Q6NYC8 613 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 CALML4Q96GE6 196 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 TRERF1Q96PN7 1200 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 C7orf25Q9BPX7 421 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 MRIQ9BWK5 157 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 ST7Q9NRC1 585 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 FAM198AQ9UFP1 575 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 GOLGA6L9A6NEM1 432 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 ZBTB5O15062 677 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 RAD21O60216 631 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 CHRNA5P30532 468 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 PDE4DQ08499 809 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 RAD9BQ6WBX8 426 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 ZSCAN29Q8IWY8 852 aaPredicted RBP17.91■□□□□ 0.46
VARS2-207ENST00000476162 NAA15Q9BXJ9 866 aaKnown RBP17.91■□□□□ 0.46
VARS2-207ENST00000476162 DHX36Q9H2U1 1008 aaKnown RBP17.91■□□□□ 0.46
VARS2-207ENST00000476162 LRWD1Q9UFC0 647 aa17.91■□□□□ 0.46
VARS2-207ENST00000476162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.91■□□□□ 0.46
VARS2-207ENST00000476162 FXR2P51116 673 aaKnown RBP eCLIP17.9■□□□□ 0.46
VARS2-207ENST00000476162 ASIC1P78348 528 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 STYK1Q6J9G0 422 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 SH3BP5LQ7L8J4 393 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 CNGA4Q8IV77 575 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 TRIM47Q96LD4 638 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 SRRTQ9BXP5 876 aaKnown RBP17.9■□□□□ 0.46
VARS2-207ENST00000476162 YY1AP1Q9H869 796 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 PI4KBQ9UBF8 816 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 EEF2P13639 858 aaKnown RBP17.9■□□□□ 0.46
VARS2-207ENST00000476162 CLK2P49760 499 aaKnown RBP17.9■□□□□ 0.46
VARS2-207ENST00000476162 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
VARS2-207ENST00000476162 AMPD3Q01432 767 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 RAD51AP2Q09MP3 1159 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 GRB10Q13322 594 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 CERKLQ49MI3 558 aaPredicted RBP17.9■□□□□ 0.46
VARS2-207ENST00000476162 TTI2Q6NXR4 508 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 LRRN4CLQ8ND94 238 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 CUL5Q93034 780 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 MTMR8Q96EF0 704 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 IDI2Q9BXS1 227 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 EXOC1Q9NV70 894 aa17.9■□□□□ 0.46
VARS2-207ENST00000476162 RNF225M0QZC1 329 aaPredicted RBP17.89■□□□□ 0.45
VARS2-207ENST00000476162 TPM1P09493 284 aa17.89■□□□□ 0.45
VARS2-207ENST00000476162 GNG11P61952 73 aa17.89■□□□□ 0.45
VARS2-207ENST00000476162 HDLBPQ00341 1268 aaKnown RBP17.89■□□□□ 0.45
VARS2-207ENST00000476162 UBXN1Q04323 297 aa17.89■□□□□ 0.45
VARS2-207ENST00000476162 STK4Q13043 487 aa17.89■□□□□ 0.45
VARS2-207ENST00000476162 ZNF772Q68DY9 489 aaPredicted RBP17.89■□□□□ 0.45
VARS2-207ENST00000476162 SECISBP2LQ93073 1101 aaKnown RBP17.89■□□□□ 0.45
VARS2-207ENST00000476162 CCDC47Q96A33 483 aaKnown RBP17.89■□□□□ 0.45
VARS2-207ENST00000476162 DHTKD1Q96HY7 919 aaPredicted RBP17.89■□□□□ 0.45
VARS2-207ENST00000476162 MRPL44Q9H9J2 332 aaKnown RBP17.89■□□□□ 0.45
VARS2-207ENST00000476162 POTEMA6NI47 508 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 URI1O94763 535 aaPredicted RBP17.88■□□□□ 0.45
VARS2-207ENST00000476162 CCDC175P0C221 793 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 FCER1AP12319 257 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 MRPL12P52815 198 aaKnown RBP17.88■□□□□ 0.45
VARS2-207ENST00000476162 ELF2Q15723 593 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 AOC3Q16853 763 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 TMEM266Q2M3C6 531 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 FBXO38Q6PIJ6 1188 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 CCDC51Q96ER9 411 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 PNMA5Q96PV4 448 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 WDR24Q96S15 920 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 THAP9Q9H5L6 903 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 BLOC1S4Q9NUP1 217 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 GREB1LQ9C091 1923 aaPredicted RBP17.88■□□□□ 0.45
VARS2-207ENST00000476162 SCN9AQ15858 1988 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 PPP4R3AQ6IN85 833 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 SV2BQ7L1I2 683 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 MKL1Q969V6 931 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 EEF2KMTQ96G04 330 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms