RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PDE4DQ08499 809 aa18.68■□□□□ 0.58
TVP23B-202ENST00000476139 MRPL44Q9H9J2 332 aaKnown RBP18.68■□□□□ 0.58
TVP23B-202ENST00000476139 ZNF446Q9NWS9 450 aa18.68■□□□□ 0.58
TVP23B-202ENST00000476139 LRWD1Q9UFC0 647 aa18.68■□□□□ 0.58
TVP23B-202ENST00000476139 NRXN2Q9P2S2 1712 aa18.68■□□□□ 0.58
TVP23B-202ENST00000476139 H7C1D1 291 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 ASIC1P78348 528 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 CERKLQ49MI3 558 aaPredicted RBP18.67■□□□□ 0.58
TVP23B-202ENST00000476139 SIAH1Q8IUQ4 282 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 RIC8AQ9NPQ8 531 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L15C9J2P7 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L13C9JLJ4 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L11C9JVI0 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L18D6R9N7 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L22D6RA61 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L17D6RBQ6 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L19D6RCP7 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L20D6RJB6 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 hCG_1984214I3L0E3 225 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 ZBTB5O15062 677 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 UBXN1Q04323 297 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L24Q0WX57 530 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 GRB10Q13322 594 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 USP17L6PQ6QN14 398 aa18.67■□□□□ 0.58
TVP23B-202ENST00000476139 ZNF713Q8N859 430 aaPredicted RBP18.67■□□□□ 0.58
TVP23B-202ENST00000476139 SNAP25P60880 206 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 SEPT2Q15019 361 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 GPATCH4Q5T3I0 446 aaKnown RBP18.66■□□□□ 0.58
TVP23B-202ENST00000476139 TDRD3Q9H7E2 651 aaKnown RBP18.66■□□□□ 0.58
TVP23B-202ENST00000476139 PSTPIP2Q9H939 334 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 PES1O00541 588 aaKnown RBP18.66■□□□□ 0.58
TVP23B-202ENST00000476139 GDF11O95390 407 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 MYL1P05976 194 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 HMGB2P26583 209 aaKnown RBP18.66■□□□□ 0.58
TVP23B-202ENST00000476139 MNS1Q8NEH6 495 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 TRIM47Q96LD4 638 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 EHD4Q9H223 541 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 BLOC1S4Q9NUP1 217 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 MYO3BQ8WXR4 1341 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 NKRFO15226 690 aaKnown RBP eCLIP18.66■□□□□ 0.58
TVP23B-202ENST00000476139 CLK2P49760 499 aaKnown RBP18.66■□□□□ 0.58
TVP23B-202ENST00000476139 MCM6Q14566 821 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 TTI2Q6NXR4 508 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 CALML4Q96GE6 196 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 PNMA5Q96PV4 448 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 LZTFL1Q9NQ48 299 aa18.66■□□□□ 0.58
TVP23B-202ENST00000476139 PSMA7O14818 248 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 SLC1A4P43007 532 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 ANKRD40Q6AI12 368 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 DYMQ7RTS9 669 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 CCDC17Q96LX7 622 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 NUP88Q99567 741 aaPredicted RBP18.65■□□□□ 0.58
TVP23B-202ENST00000476139 C7orf25Q9BPX7 421 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 CUEDC2Q9H467 287 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 PHLPP2Q6ZVD8 1323 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 SCN9AQ15858 1988 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 JAG1P78504 1218 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 SPAG1Q07617 926 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 UBXN4Q92575 508 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 CUL5Q93034 780 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 ZBTB9Q96C00 473 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 DUSP9Q99956 384 aaKnown RBP18.65■□□□□ 0.58
TVP23B-202ENST00000476139 ZSWIM4Q9H7M6 989 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 SLC39A2Q9NP94 309 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 EXOC1Q9NV70 894 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 QSER1Q2KHR3 1735 aa18.65■□□□□ 0.58
TVP23B-202ENST00000476139 TUBB4AP04350 444 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 ECM1Q16610 540 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 KCNK18Q7Z418 384 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 ANKRD20A12PQ8NF67 263 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 HAS1Q92839 578 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 IDI2Q9BXS1 227 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 DHX36Q9H2U1 1008 aaKnown RBP18.64■□□□□ 0.57
TVP23B-202ENST00000476139 ADGRG1Q9Y653 693 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 MYMKA6NI61 221 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 STIM1Q13586 685 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 CSGALNACT2Q8N6G5 542 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 MTMR8Q96EF0 704 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 PRMT6Q96LA8 375 aaPredicted RBP18.64■□□□□ 0.57
TVP23B-202ENST00000476139 SLX4Q8IY92 1834 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 ITIH6Q6UXX5 1313 aa18.64■□□□□ 0.57
TVP23B-202ENST00000476139 FXR2P51116 673 aaKnown RBP eCLIP18.63■□□□□ 0.57
TVP23B-202ENST00000476139 CLCN6P51797 869 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 SLFN13Q68D06 897 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
TVP23B-202ENST00000476139 STYK1Q6J9G0 422 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 KIAA0895Q8NCT3 520 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 DDX25Q9UHL0 483 aaKnown RBP18.63■□□□□ 0.57
TVP23B-202ENST00000476139 PCDHA1Q9Y5I3 950 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 MYH8P13535 1937 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 ABL1P00519 1130 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 CASQ1P31415 396 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 MRPL12P52815 198 aaKnown RBP18.63■□□□□ 0.57
TVP23B-202ENST00000476139 ERVK-24P63145 666 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 CNGA4Q8IV77 575 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 C7orf43Q8WVR3 580 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 MRIQ9BWK5 157 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 PDGFDQ9GZP0 370 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms