RNA–Protein interactions for RNA: ENST00000475892.5

SUPT20H-212, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best) BASIC

Gene SUPT20H, Length 2,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-212ENST00000475892 SAMD3Q8N6K7 520 aa17.24■□□□□ 0.35
SUPT20H-212ENST00000475892 SPC24Q8NBT2 197 aa17.24■□□□□ 0.35
SUPT20H-212ENST00000475892 LPAR1Q92633 364 aa17.24■□□□□ 0.35
SUPT20H-212ENST00000475892 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
SUPT20H-212ENST00000475892 MTRQ99707 1265 aa17.24■□□□□ 0.35
SUPT20H-212ENST00000475892 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
SUPT20H-212ENST00000475892 PPP2R3BQ9Y5P8 575 aa17.24■□□□□ 0.35
SUPT20H-212ENST00000475892 MEIS2O14770 477 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 RPN1P04843 607 aaKnown RBP17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 CYP3A4P08684 503 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 CCDC186Q7Z3E2 898 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 SLFN12Q8IYM2 578 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 KCNF1Q9H3M0 494 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 CIITAP33076 1130 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 RASA3Q14644 834 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 RWDD2AQ9UIY3 292 aa17.23■□□□□ 0.35
SUPT20H-212ENST00000475892 KDM3AQ9Y4C1 1321 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 PPP1R3GB7ZBB8 358 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 SREBF1P36956 1147 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 UBE2SQ16763 222 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 APOBEC3FQ8IUX4 373 aaKnown RBP17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 XPO4Q9C0E2 1151 aaKnown RBP17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 ABCB11O95342 1321 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 OFD1O75665 1012 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 RHOBTB3O94955 611 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 GMPSP49915 693 aaPredicted RBP17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 ISM2Q6H9L7 571 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 KIAA1524Q8TCG1 905 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 IFNKQ9P0W0 207 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 LRWD1Q9UFC0 647 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 SYNRGQ9UMZ2 1314 aa17.22■□□□□ 0.35
SUPT20H-212ENST00000475892 SLC37A4O43826 429 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 TDP2O95551 362 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 PTGS1P23219 599 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 DCAF15Q66K64 600 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 MMTAG2Q9BU76 263 aaKnown RBP17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 TTC12Q9H892 705 aaPredicted RBP17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 KCND1Q9NSA2 647 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 RABGAP1Q9Y3P9 1069 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 WDR46O15213 610 aaKnown RBP17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 TECP42680 631 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 ECE1P42892 770 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 KCNJ6P48051 423 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 RASSF8Q8NHQ8 419 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 CTAGE1Q96RT6 745 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 KIAA1683Q9H0B3 1180 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 EHMT1Q9H9B1 1298 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 FANCLQ9NW38 375 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.35
SUPT20H-212ENST00000475892 FDX1P10109 184 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 PLCG1P19174 1290 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 UBASH3AP57075 661 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 FMR1Q06787 632 aaKnown RBP eCLIP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 ACER1Q8TDN7 264 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 CNOT7Q9UIV1 285 aaKnown RBP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 MRPL11Q9Y3B7 192 aaKnown RBP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 RAD21O60216 631 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 GHRHRQ02643 423 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 KRT79Q5XKE5 535 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 ZNF112Q9UJU3 913 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 RBBP6Q7Z6E9 1792 aaKnown RBP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 SPDYE3A6NKU9 549 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 KLRC4O43908 158 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 SERPINC1P01008 464 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 TXKP42681 527 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 TERF1P54274 439 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 SPAG1Q07617 926 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 CDKAL1Q5VV42 579 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 FAM20AQ96MK3 541 aa17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 MAP3K20Q9NYL2 800 aaKnown RBP17.2■□□□□ 0.34
SUPT20H-212ENST00000475892 FAM83BQ5T0W9 1011 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 FOXR2Q6PJQ5 311 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 HAS1Q92839 578 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 PVALEFA0A1B0GWK0 134 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 PP2D1A8MPX8 630 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 ARHGAP4P98171 946 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 STIM1Q13586 685 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 GIMAP8Q8ND71 665 aaPredicted RBP17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 NOC3LQ8WTT2 800 aaKnown RBP17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 ZNF341Q9BYN7 854 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 MAF1Q9H063 256 aa17.19■□□□□ 0.34
SUPT20H-212ENST00000475892 H7C1D1 291 aa17.18■□□□□ 0.34
SUPT20H-212ENST00000475892 USP14P54578 494 aa17.18■□□□□ 0.34
SUPT20H-212ENST00000475892 RASSF7Q02833 373 aa17.18■□□□□ 0.34
SUPT20H-212ENST00000475892 PAK1Q13153 545 aa17.18■□□□□ 0.34
SUPT20H-212ENST00000475892 GRB10Q13322 594 aa17.18■□□□□ 0.34
SUPT20H-212ENST00000475892 CCDC144BQ3MJ40 725 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms