RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 GZF1Q9H116 711 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-227ENST00000475832 DDX19AQ9NUU7 478 aaKnown RBP13.93□□□□□ -0.18
MRPL55-227ENST00000475832 HOXC10Q9NYD6 342 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 PPP1R9AQ9ULJ8 1098 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 PCDHA7Q9UN72 937 aa13.93□□□□□ -0.18
MRPL55-227ENST00000475832 MYPNQ86TC9 1320 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 MANSC4A6NHS7 340 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-227ENST00000475832 SPDYE3A6NKU9 549 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 LAD1O00515 517 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 ICAM1P05362 532 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-227ENST00000475832 TOB1P50616 345 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-227ENST00000475832 SNAP25P60880 206 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
MRPL55-227ENST00000475832 PABPC4Q13310 644 aaKnown RBP eCLIP13.92□□□□□ -0.181e-6■■■■■ 30.4
MRPL55-227ENST00000475832 COG2Q14746 738 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 PTPAQ15257 358 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 ZNF174Q15697 407 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 INF2Q27J81 1249 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 CCDC183Q5T5S1 534 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 MCF2L2Q86YR7 1114 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 OPTNQ96CV9 577 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 MS4A4AQ96JQ5 239 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 FAM13BQ9NYF5 915 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 CCPG1Q9ULG6 757 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 ATAD5Q96QE3 1844 aa13.92□□□□□ -0.18
MRPL55-227ENST00000475832 GCOM1H8Y6P7 765 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-227ENST00000475832 POLR2MP0CAP2 368 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 CMA1P23946 247 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 MCM7P33993 719 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 OAZ1P54368 228 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
MRPL55-227ENST00000475832 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 FSIP1Q8NA03 581 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-227ENST00000475832 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 CFHR5Q9BXR6 569 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
MRPL55-227ENST00000475832 FAM205CA6NFA0 338 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 KINO60870 393 aaKnown RBP13.9□□□□□ -0.18
MRPL55-227ENST00000475832 GCFC2P16383 781 aaKnown RBP13.9□□□□□ -0.18
MRPL55-227ENST00000475832 DSG3P32926 999 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 FAM160A1Q05DH4 1040 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 UBE2SQ16763 222 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 EARS2Q5JPH6 523 aaKnown RBP13.9□□□□□ -0.18
MRPL55-227ENST00000475832 ARL6IP4Q66PJ3 421 aaKnown RBP13.9□□□□□ -0.18
MRPL55-227ENST00000475832 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 CATSPERGQ6ZRH7 1159 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
MRPL55-227ENST00000475832 TBCKQ8TEA7 893 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 SLC38A10Q9HBR0 1119 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 TMEM260Q9NX78 707 aa13.9□□□□□ -0.18
MRPL55-227ENST00000475832 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
MRPL55-227ENST00000475832 SRPRBQ9Y5M8 271 aaKnown RBP13.9□□□□□ -0.18
MRPL55-227ENST00000475832 A0A0G2JLL6 359 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 PIK3CDO00329 1044 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 MARCH6O60337 910 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 CCNT1O60563 726 aaKnown RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 PTPREP23469 700 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 GTF2A2P52657 109 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 IRX3P78415 501 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 ATP2C1P98194 919 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 PTGDRQ13258 359 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 TKFCQ3LXA3 575 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 FBXO46Q6PJ61 603 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 PRRT2Q7Z6L0 340 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 CPXCR1Q8N123 301 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 PTPN18Q99952 460 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 PYM1Q9BRP8 204 aaKnown RBP13.89□□□□□ -0.19
MRPL55-227ENST00000475832 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 RABGAP1Q9Y3P9 1069 aa13.89□□□□□ -0.19
MRPL55-227ENST00000475832 IGF2BP3O00425 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
MRPL55-227ENST00000475832 VWA5AO00534 786 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 IRF6O14896 467 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 CTAGE5O15320 804 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 NEMFO60524 1076 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 ALDH1A1P00352 501 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 CFBP00751 764 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 ALAS1P13196 640 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 OSBPP22059 807 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 TXLNAP40222 546 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 USP11P51784 963 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 GSE1Q14687 1217 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 ZSCAN23Q3MJ62 389 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 NOM1Q5C9Z4 860 aaKnown RBP13.88□□□□□ -0.19
MRPL55-227ENST00000475832 USP17L6PQ6QN14 398 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 DTHD1Q6ZMT9 781 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 MB21D1Q8N884 522 aa13.88□□□□□ -0.19
MRPL55-227ENST00000475832 ZNF296Q8WUU4 475 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms