RNA–Protein interactions for RNA: ENST00000475585.1

HMCN1-203, Transcript of hemicentin 1, humanhuman

TSL 3

Gene HMCN1, Length 389 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-203ENST00000475585 RTEL1Q9NZ71 1219 aa4.39□□□□□ -1.71
HMCN1-203ENST00000475585 PRR13Q9NZ81 148 aa4.39□□□□□ -1.71
HMCN1-203ENST00000475585 KCNH3Q9ULD8 1083 aa4.39□□□□□ -1.71
HMCN1-203ENST00000475585 SF3B6Q9Y3B4 125 aaKnown RBP4.39□□□□□ -1.71
HMCN1-203ENST00000475585 DNAJC25-GNG10A0A024R161 153 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 A0A087WZG4 1122 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 RBAK-RBAKDNI3L0D1 243 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 MEIS1O00470 390 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 SIGLEC6O43699 453 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 TRIM13O60858 407 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 RAPGEF3O95398 923 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 PRAMEF1O95521 474 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 VIL1P09327 827 aaKnown RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 PABPC1P11940 636 aaKnown RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 GRIA2P42262 883 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 KIR3DL1P43629 444 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 NMIQ13287 307 aaPredicted RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 CBX2Q14781 532 aaPredicted RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 FNDC3BQ53EP0 1204 aaKnown RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 GTF2IRD2BQ6EKJ0 949 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 NSMFQ6X4W1 530 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 TMC3Q7Z5M5 1100 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 GTF2IRD2Q86UP8 949 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 SCUBE1Q8IWY4 988 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 MFSD4AQ8N468 514 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 ARHGEF39Q8N4T4 335 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 MARCH10Q8NA82 808 aaPredicted RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 DTWD2Q8NBA8 298 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 CXorf38Q8TB03 319 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 KCNN1Q92952 543 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 OSBP2Q969R2 916 aa4.38□□□□□ -1.71
HMCN1-203ENST00000475585 ASCC2Q9H1I8 757 aaPredicted RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 GPR55Q9Y2T6 319 aaPredicted RBP4.38□□□□□ -1.71
HMCN1-203ENST00000475585 GNAT3A8MTJ3 354 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 H0Y8X5 98 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 IGF2BP3O00425 579 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMCN1-203ENST00000475585 RAB11FIP3O75154 756 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 LRRN2O75325 713 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 RFPL3O75679 317 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 SNRPB2P08579 225 aaKnown RBP4.37□□□□□ -1.71
HMCN1-203ENST00000475585 MYCLP1P12525 358 aaPredicted RBP4.37□□□□□ -1.71
HMCN1-203ENST00000475585 STAT3P40763 770 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 KCNJ6P48051 423 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 GFRA1P56159 465 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 AMPD3Q01432 767 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 AMPD2Q01433 879 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 MAP4K2Q12851 820 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 CT47A1Q5JQC4 288 aaPredicted RBP4.37□□□□□ -1.71
HMCN1-203ENST00000475585 CRTC3Q6UUV7 619 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 C22orf34Q6ZV56 151 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 THNSL2Q86YJ6 484 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 CHAC2Q8WUX2 184 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 KCTD13Q8WZ19 329 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 XYLT2Q9H1B5 865 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 NKX2-4Q9H2Z4 354 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 ATP13A1Q9HD20 1204 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 CHST7Q9NS84 486 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 SEMA3GQ9NS98 782 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 NDOR1Q9UHB4 597 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 GTF2IRD1Q9UHL9 959 aa4.37□□□□□ -1.71
HMCN1-203ENST00000475585 STXBP3O00186 592 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 DLX3O60479 287 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 PDE8AO60658 829 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 CD3EP07766 207 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 SRFP11831 508 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 SOX5P35711 763 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 GABREP78334 506 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 CLEC16AQ2KHT3 1053 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 DPY19L1Q2PZI1 675 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 TRIM61Q5EBN2 209 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 CWF19L1Q69YN2 538 aaKnown RBP4.36□□□□□ -1.71
HMCN1-203ENST00000475585 KRT26Q7Z3Y9 468 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 BRAPQ7Z569 592 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 Q96M66 194 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 DIS3Q9Y2L1 958 aaKnown RBP4.36□□□□□ -1.71
HMCN1-203ENST00000475585 CAPN6Q9Y6Q1 641 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 CNTNAP4Q9C0A0 1308 aa4.36□□□□□ -1.71
HMCN1-203ENST00000475585 SHISA3A0PJX4 238 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 BLACEA4D250 179 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 PRR33A8MZF0 331 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 FAM155AB1AL88 458 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-203ENST00000475585 CAPNS1P04632 268 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 GSNP06396 782 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 ADRB1P08588 477 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 C6orf222P0C671 652 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-203ENST00000475585 ECI1P42126 302 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 CLCN7P51798 805 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 ERVFC1P60507 584 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 POU4F1Q01851 419 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 SF1Q15637 639 aaKnown RBP4.35□□□□□ -1.71
HMCN1-203ENST00000475585 PRSS53Q2L4Q9 553 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 RPUSD2Q8IZ73 545 aaKnown RBP4.35□□□□□ -1.71
HMCN1-203ENST00000475585 TMEM145Q8NBT3 493 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 PIWIL2Q8TC59 973 aaKnown RBP4.35□□□□□ -1.71
HMCN1-203ENST00000475585 TARS2Q9BW92 718 aaKnown RBP4.35□□□□□ -1.71
HMCN1-203ENST00000475585 HDAC8Q9BY41 377 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 CAAP1Q9H8G2 361 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 SLC52A2Q9HAB3 445 aa4.35□□□□□ -1.71
HMCN1-203ENST00000475585 MAGEC2Q9UBF1 373 aaPredicted RBP4.35□□□□□ -1.71
HMCN1-203ENST00000475585 MINPP1Q9UNW1 487 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms