RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
NME1-206ENST00000475573 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 ALAS1P13196 640 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 MRE11P49959 708 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 FAM178BQ8IXR5 827 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 ZNF444Q8N0Y2 327 aaPredicted RBP18.13■□□□□ 0.49
NME1-206ENST00000475573 GJD3Q8N144 294 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 GDPD5Q8WTR4 605 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
NME1-206ENST00000475573 STRBPQ96SI9 672 aaKnown RBP18.13■□□□□ 0.49
NME1-206ENST00000475573 MTG1Q9BT17 334 aaPredicted RBP18.13■□□□□ 0.49
NME1-206ENST00000475573 UBE2ZQ9H832 354 aaPredicted RBP18.13■□□□□ 0.49
NME1-206ENST00000475573 GPHNQ9NQX3 736 aaPredicted RBP18.13■□□□□ 0.49
NME1-206ENST00000475573 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
NME1-206ENST00000475573 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 MYL3P08590 195 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 KCNJ6P48051 423 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 IKQ13123 557 aaPredicted RBP18.12■□□□□ 0.49
NME1-206ENST00000475573 BFSP2Q13515 415 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 FAM47CQ5HY64 1035 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 NFRKBQ6P4R8 1299 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 SPRED2Q7Z698 418 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 GMCL1Q96IK5 515 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 SIP14410 1827 aa18.12■□□□□ 0.49
NME1-206ENST00000475573 TRIP12Q14669 1992 aaPredicted RBP18.11■□□□□ 0.49
NME1-206ENST00000475573 ALADP13716 330 aa18.11■□□□□ 0.49
NME1-206ENST00000475573 LRRFIP1Q32MZ4 808 aaKnown RBP18.11■□□□□ 0.49
NME1-206ENST00000475573 NBPF20Q3BBV1 942 aa18.11■□□□□ 0.49
NME1-206ENST00000475573 LEXMQ3ZCV2 418 aa18.11■□□□□ 0.49
NME1-206ENST00000475573 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
NME1-206ENST00000475573 WDR11Q9BZH6 1224 aa18.11■□□□□ 0.49
NME1-206ENST00000475573 WDFY4Q6ZS81 3184 aa18.11■□□□□ 0.49
NME1-206ENST00000475573 RAD50Q92878 1312 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.1■□□□□ 0.49
NME1-206ENST00000475573 LOC102724159A0A0B4J2E5 919 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 LCHNA4D1U4 455 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 PLA2G6O60733 806 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 SLC1A4P43007 532 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 PTPN11Q06124 597 aaPredicted RBP18.1■□□□□ 0.49
NME1-206ENST00000475573 PWP2Q15269 919 aaKnown RBP18.1■□□□□ 0.49
NME1-206ENST00000475573 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
NME1-206ENST00000475573 MUM1L1Q5H9M0 696 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 OR6J1Q8NGC5 347 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 KCNH6Q9H252 994 aa18.1■□□□□ 0.49
NME1-206ENST00000475573 HMMRO75330 724 aa18.09■□□□□ 0.49
NME1-206ENST00000475573 PRDM1O75626 825 aa18.09■□□□□ 0.49
NME1-206ENST00000475573 SSTR3P32745 418 aaPredicted RBP18.09■□□□□ 0.49
NME1-206ENST00000475573 WDR5P61964 334 aaKnown RBP18.09■□□□□ 0.49
NME1-206ENST00000475573 NHLH1Q02575 133 aa18.09■□□□□ 0.49
NME1-206ENST00000475573 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
NME1-206ENST00000475573 NSMFQ6X4W1 530 aa18.09■□□□□ 0.49
NME1-206ENST00000475573 UIMC1Q96RL1 719 aa18.09■□□□□ 0.49
NME1-206ENST00000475573 ADD3Q9UEY8 706 aaKnown RBP18.09■□□□□ 0.49
NME1-206ENST00000475573 NOD1Q9Y239 953 aa18.09■□□□□ 0.49
NME1-206ENST00000475573 RBM47A0AV96 593 aaKnown RBP18.08■□□□□ 0.48
NME1-206ENST00000475573 KPNA6O60684 536 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 TSPY3P0CV98 308 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 TSPY8P0CW00 308 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 KCNA5P22460 613 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 TDO2P48775 406 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 CCDC155Q8N6L0 562 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 NEDD1Q8NHV4 660 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.08■□□□□ 0.48
NME1-206ENST00000475573 CAGE1Q8TC20 777 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 TGS1Q96RS0 853 aaKnown RBP18.08■□□□□ 0.48
NME1-206ENST00000475573 ZBED2Q9BTP6 218 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 SUGCTQ9HAC7 445 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 EPB41L4AQ9HCS5 686 aaPredicted RBP18.08■□□□□ 0.48
NME1-206ENST00000475573 CCPG1Q9ULG6 757 aa18.08■□□□□ 0.48
NME1-206ENST00000475573 NKRFO15226 690 aaKnown RBP eCLIP18.07■□□□□ 0.48
NME1-206ENST00000475573 ALDH5A1P51649 535 aaPredicted RBP18.07■□□□□ 0.48
NME1-206ENST00000475573 ERVK-21P61565 698 aa18.07■□□□□ 0.48
NME1-206ENST00000475573 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
NME1-206ENST00000475573 SNX27Q96L92 541 aa18.07■□□□□ 0.48
NME1-206ENST00000475573 PURBQ96QR8 312 aaKnown RBP18.07■□□□□ 0.48
NME1-206ENST00000475573 ZNF318Q5VUA4 2279 aa18.07■□□□□ 0.48
NME1-206ENST00000475573 IL9P15248 144 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 GNAT2P19087 354 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 MCCP23508 829 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 PPP2R5BQ15173 497 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 PUS10Q3MIT2 529 aaKnown RBP18.06■□□□□ 0.48
NME1-206ENST00000475573 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 PTCRAQ6ISU1 281 aaPredicted RBP18.06■□□□□ 0.48
NME1-206ENST00000475573 APPBP2Q92624 585 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 RAD9AQ99638 391 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
NME1-206ENST00000475573 A6NJR5 290 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 DCXO43602 365 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 GJB5O95377 273 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 PARNO95453 639 aaKnown RBP18.05■□□□□ 0.48
NME1-206ENST00000475573 ICAM1P05362 532 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 SNAP25P60880 206 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 DEFB103AP81534 67 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 PDE4BQ07343 736 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 CNKSR3Q6P9H4 555 aa18.05■□□□□ 0.48
NME1-206ENST00000475573 KCTD1Q719H9 257 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms