RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 ZNF213O14771 459 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 KDM4AO75164 1064 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 PCP11498 1178 aaKnown RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 CSF2RAP15509 400 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 CALML3P27482 149 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 ALDH5A1P51649 535 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 PSMC6P62333 389 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 RPS6P62753 249 aaKnown RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 ITGA7Q13683 1181 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 DUSP28Q4G0W2 176 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 ZNF697Q5TEC3 545 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 RASIP1Q5U651 963 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 KIAA1211Q6ZU35 1233 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 TLK2Q86UE8 772 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 RNPC3Q96LT9 517 aaKnown RBP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDAC3-207ENST00000475549 TRPV6Q9H1D0 765 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 SPC25Q9HBM1 224 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 Q9Y3F1 56 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 CHD9Q3L8U1 2897 aa8.26□□□□□ -1.09
HDAC3-207ENST00000475549 PTPDC1A2A3K4 754 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 B4E1Z4 1266 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 ACRP10323 421 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 GSPT1P15170 499 aaKnown RBP8.25□□□□□ -1.09
HDAC3-207ENST00000475549 EDNRBP24530 442 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 CYP2C18P33260 490 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 GRIN2CQ14957 1233 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 SLC35G1Q2M3R5 365 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 TMEM240Q5SV17 173 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 RNF207Q6ZRF8 634 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 ENAHQ8N8S7 591 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-207ENST00000475549 ESR2Q92731 530 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 ZSCAN10Q96SZ4 725 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-207ENST00000475549 DSCC1Q9BVC3 393 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 WDR11Q9BZH6 1224 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 PPP1R12CQ9BZL4 782 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 RNF41Q9H4P4 317 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-207ENST00000475549 VTA1Q9NP79 307 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 CXXC1Q9P0U4 656 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-207ENST00000475549 COL20A1Q9P218 1284 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 SUPT16HQ9Y5B9 1047 aaKnown RBP8.25□□□□□ -1.09
HDAC3-207ENST00000475549 TAF6LQ9Y6J9 622 aa8.25□□□□□ -1.09
HDAC3-207ENST00000475549 LTBP2Q14767 1821 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-207ENST00000475549 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-207ENST00000475549 B4GALT4O60513 344 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 CABYRO75952 493 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 ARIH2O95376 493 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 PBX2P40425 430 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 PURAQ00577 322 aaKnown RBP8.24□□□□□ -1.09
HDAC3-207ENST00000475549 USH1GQ495M9 461 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 ZNF365Q70YC5 407 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 CYB5R4Q7L1T6 521 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 ADGRF4Q8IZF3 695 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 STAG2Q8N3U4 1231 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 PNMA1Q8ND90 353 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 RGS22Q8NE09 1264 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 PPP1R13LQ8WUF5 828 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 MYLIPQ8WY64 445 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 COPS5Q92905 334 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 WNT8AQ9H1J5 351 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 SENP2Q9HC62 589 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 DIAPH3Q9NSV4 1193 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 TRMT13Q9NUP7 481 aaKnown RBP8.24□□□□□ -1.09
HDAC3-207ENST00000475549 MROH7Q68CQ1 1323 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 WDR19Q8NEZ3 1342 aa8.24□□□□□ -1.09
HDAC3-207ENST00000475549 MYH8P13535 1937 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 ZNFX1Q9P2E3 1918 aaKnown RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 OPLAHO14841 1288 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 PPP1R11O60927 126 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 DNAJB2P25686 324 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 MFAP1P55081 439 aaKnown RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 PTH1RQ03431 593 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 SEC23AQ15436 765 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 CDC37Q16543 378 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 GPATCH4Q5T3I0 446 aaKnown RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 TTC22Q5TAA0 569 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 CCDC62Q6P9F0 684 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 SYTL5Q8TDW5 730 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 TAAR1Q96RJ0 339 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 NOC4LQ9BVI4 516 aaKnown RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 ALDH8A1Q9H2A2 487 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 HIPK3Q9H422 1215 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 JMJD4Q9H9V9 463 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 ADD3Q9UEY8 706 aaKnown RBP8.23□□□□□ -1.09
HDAC3-207ENST00000475549 TNKSO95271 1327 aa8.23□□□□□ -1.09
HDAC3-207ENST00000475549 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 LOC102724159A0A0B4J2E5 919 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 A6NJR5 290 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 HIP1O00291 1037 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 ZEB2O60315 1214 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 CYP21A2P08686 494 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 CYP2C9P11712 490 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 CCL23P55773 120 aa8.22□□□□□ -1.09
HDAC3-207ENST00000475549 IRX6P78412 446 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-207ENST00000475549 PPIGQ13427 754 aaKnown RBP eCLIP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms