RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 PDHBP11177 359 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 CCL23P55773 120 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 DUSP28Q4G0W2 176 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 SLC30A10Q6XR72 485 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 USP38Q8NB14 1042 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 HERVK_113Q902F9 699 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 CXXC1Q9P0U4 656 aaPredicted RBP16.91■□□□□ 0.3
COL2A1-205ENST00000474996 ZMYM6O95789 1325 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 CCDC171Q6TFL3 1326 aa16.91■□□□□ 0.3
COL2A1-205ENST00000474996 FGBP02675 491 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 CALML3P27482 149 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 AKNAD1Q5T1N1 836 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 MFSD6Q6ZSS7 791 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 TBC1D10CQ8IV04 446 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 CLEC4DQ8WXI8 215 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 RILPL2Q969X0 211 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 NOC4LQ9BVI4 516 aaKnown RBP16.9■□□□□ 0.3
COL2A1-205ENST00000474996 SEZ6LQ9BYH1 1024 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 WDR11Q9BZH6 1224 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 WNT8AQ9H1J5 351 aa16.9■□□□□ 0.3
COL2A1-205ENST00000474996 ZNF543Q08ER8 600 aa16.89■□□□□ 0.29
COL2A1-205ENST00000474996 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.29
COL2A1-205ENST00000474996 OTOP2Q7RTS6 562 aa16.89■□□□□ 0.29
COL2A1-205ENST00000474996 TICAM2Q86XR7 235 aa16.89■□□□□ 0.29
COL2A1-205ENST00000474996 TTC14Q96N46 770 aa16.89■□□□□ 0.29
COL2A1-205ENST00000474996 MTIF3Q9H2K0 278 aaKnown RBP16.89■□□□□ 0.29
COL2A1-205ENST00000474996 PRDM12Q9H4Q4 367 aa16.89■□□□□ 0.29
COL2A1-205ENST00000474996 LOC102724159A0A0B4J2E5 919 aa16.88■□□□□ 0.29
COL2A1-205ENST00000474996 RBM47A0AV96 593 aaKnown RBP16.88■□□□□ 0.29
COL2A1-205ENST00000474996 PCP11498 1178 aaKnown RBP16.88■□□□□ 0.29
COL2A1-205ENST00000474996 PWP2Q15269 919 aaKnown RBP16.88■□□□□ 0.29
COL2A1-205ENST00000474996 RAB30Q15771 203 aa16.88■□□□□ 0.29
COL2A1-205ENST00000474996 OR6J1Q8NGC5 347 aa16.88■□□□□ 0.29
COL2A1-205ENST00000474996 GAS2L1Q99501 681 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-205ENST00000474996 ALDH8A1Q9H2A2 487 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-205ENST00000474996 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
COL2A1-205ENST00000474996 MSRAQ9UJ68 235 aa16.88■□□□□ 0.29
COL2A1-205ENST00000474996 CHD9Q3L8U1 2897 aa16.88■□□□□ 0.29
COL2A1-205ENST00000474996 SPTBN5Q9NRC6 3674 aaKnown RBP16.88■□□□□ 0.29
COL2A1-205ENST00000474996 MYL3P08590 195 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 SNHG28P0DPA3 235 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 CPT1AP50416 773 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
COL2A1-205ENST00000474996 PURAQ00577 322 aaKnown RBP16.87■□□□□ 0.29
COL2A1-205ENST00000474996 PDE4DQ08499 809 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 PPM1EQ8WY54 764 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 SCLYQ96I15 445 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 ZKSCAN3Q9BRR0 538 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 NKX2-4Q9H2Z4 354 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 TRMT13Q9NUP7 481 aaKnown RBP16.87■□□□□ 0.29
COL2A1-205ENST00000474996 PNMA2Q9UL42 364 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 NEDD4P46934 1319 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 WDR19Q8NEZ3 1342 aa16.87■□□□□ 0.29
COL2A1-205ENST00000474996 LAMA4Q16363 1823 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 SCN10AQ9Y5Y9 1956 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 GOLGA8HP0CJ92 632 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 CYP2C9P11712 490 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 SDSP20132 328 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 USH1GQ495M9 461 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 B4GALNT3Q6L9W6 998 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 ESR2Q92731 530 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 MTG1Q9BT17 334 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-205ENST00000474996 CPVLQ9H3G5 476 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 RNF41Q9H4P4 317 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-205ENST00000474996 PRDM6Q9NQX0 595 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 GPHNQ9NQX3 736 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-205ENST00000474996 YBX2Q9Y2T7 364 aaKnown RBP16.86■□□□□ 0.29
COL2A1-205ENST00000474996 TNKSO95271 1327 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 SCN5AQ14524 2016 aa16.86■□□□□ 0.29
COL2A1-205ENST00000474996 ZNF213O14771 459 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 EDNRBP24530 442 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 MFAP1P55081 439 aaKnown RBP16.85■□□□□ 0.29
COL2A1-205ENST00000474996 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 GPATCH4Q5T3I0 446 aaKnown RBP16.85■□□□□ 0.29
COL2A1-205ENST00000474996 RPUSD2Q8IZ73 545 aaKnown RBP16.85■□□□□ 0.29
COL2A1-205ENST00000474996 DNERQ8NFT8 737 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 PPP1R13LQ8WUF5 828 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 COPS5Q92905 334 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 VWCEQ96DN2 955 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 MPHOSPH6Q99547 160 aaKnown RBP16.85■□□□□ 0.29
COL2A1-205ENST00000474996 UBA5Q9GZZ9 404 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 TTC28Q96AY4 2481 aa16.85■□□□□ 0.29
COL2A1-205ENST00000474996 ZBBXA8MT70 800 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 SUPT20HL2P0C7V6 817 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 RABGGTBP53611 331 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 ADGRE1Q14246 886 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
COL2A1-205ENST00000474996 FAM47CQ5HY64 1035 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 DGKHQ86XP1 1220 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 SMC5Q8IY18 1101 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 SCFD2Q8WU76 684 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 SYMPKQ92797 1274 aaKnown RBP16.84■□□□□ 0.29
COL2A1-205ENST00000474996 SLC28A3Q9HAS3 691 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 SLC4A7Q9Y6M7 1214 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 RAD50Q92878 1312 aa16.84■□□□□ 0.29
COL2A1-205ENST00000474996 CHD7Q9P2D1 2997 aa16.83■□□□□ 0.29
COL2A1-205ENST00000474996 NKRFO15226 690 aaKnown RBP eCLIP16.83■□□□□ 0.28
COL2A1-205ENST00000474996 TXNP10599 105 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms